Nonlabens ulvanivorans: R1T42_07810
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Entry
R1T42_07810 CDS
T09493
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul02024
Quorum sensing
nul03060
Protein export
nul03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
R1T42_07810 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
R1T42_07810 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R1T42_07810 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nul02044
]
R1T42_07810 (ffh)
Enzymes [BR:
nul01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
R1T42_07810 (ffh)
Secretion system [BR:
nul02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
R1T42_07810 (ffh)
Eukaryotic Sec-SRP protein
R1T42_07810 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
AAA_22
CbiA
CLP1_P
AAA_24
AAA_33
APS_kinase
AAA_31
nSTAND3
6PF2K
AAA_17
KTI12
NACHT
TsaE
ATP_bind_1
DUF5693
AAA_18
DO-GTPase1
NPHP3_N
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
WOI21586
LinkDB
All DBs
Position
1746144..1747472
Genome browser
AA seq
442 aa
AA seq
DB search
MFDNLTDKLDKAMHVLKGHGSITEVNVADTLKEIRRALVDADVNYKIAKEFTSRAKEKAL
GQGVLTTLKPGQLLTKIVKDELTELMGGDVTGLNLTGNPTVILMSGLQGSGKTTFSGKLA
NFLKSKKSKKPLLVACDIYRPAAIDQLHVVGESVGVEVYSNREEKDPVKISEAAISHAKQ
NGFNVVIIDTAGRLAVDEQMMTEIANVHAAVKPQETLFVVDSMTGQDAVNTAKAFNERLN
FDGVILTKLDGDTRGGAALSIKSVVDKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVV
SLVERAQEQFDEEQARKLSKKIAKNQFGFDDFLSQIQQIKKMGNMKDLMGMIPGAGKMLK
DVDIDDDAFKGIEAIIHSMTIEERTRPQVINGSRKKRIAKGSGTTVTEVNQLLKQFDQMS
KMMKMMQGGKGKAMMNALGKMR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaactgacaaactcgataaagccatgcacgtccttaaaggacatgga
agcattaccgaagtaaacgttgcagatactctcaaagaaatacgtcgcgcccttgtggat
gccgatgtaaactataaaatagccaaagaatttacctctcgcgctaaagaaaaagcgtta
ggtcaaggcgtacttacaactcttaaaccagggcaacttcttactaaaattgtaaaagat
gaacttacagagttaatgggtggtgatgttactggacttaacttaaccggtaaccctact
gttattttaatgtcaggtttacaaggttctggtaaaacaactttttcaggtaaacttgcc
aactttttaaagagtaaaaagagtaaaaaacctcttttagtggcttgtgatatttatcgt
ccggcagcaattgaccaattgcatgttgtcggtgaaagtgtcggtgttgaagtatactct
aatcgagaggaaaaagatcctgtaaagatttctgaagccgctatttctcatgccaaacaa
aatggctttaatgtggttatcattgatacagcaggtcgtcttgcggttgatgaacaaatg
atgactgagattgcaaatgtgcatgctgcagttaaacctcaagaaacactttttgtagtt
gactctatgacaggtcaggatgctgttaatactgccaaagcatttaatgaacgattaaac
tttgatggtgttatacttactaaactagatggtgacacacgtggtggtgctgcattatct
attaaatctgttgttgataaacctattaaattcataggtactggtgagaagatggaagct
attgatgttttctacccatctcgtatggcagatcgtattctgggaatgggtgatgttgtt
tctcttgtagagcgcgctcaagaacagtttgatgaagagcaagctcgtaaattgagtaaa
aaaattgctaaaaatcaatttggctttgatgatttcttatcacagatacagcaaatcaag
aagatgggtaacatgaaagatttaatgggtatgattccaggtgctggaaaaatgcttaaa
gatgttgatatagatgatgatgcttttaaaggtatagaagctataattcattctatgact
atagaagaaagaacacgtccacaagtgattaacggatctcgtaaaaaaagaatcgcaaaa
ggtagtggtactaccgttactgaagtcaaccaactgcttaagcagtttgaccagatgagc
aaaatgatgaaaatgatgcaaggcggtaaaggtaaagccatgatgaatgctctaggaaaa
atgagataa
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