Nonlabens ulvanivorans: R1T42_08280
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Entry
R1T42_08280 CDS
T09493
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R1T42_08280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nul03021
]
R1T42_08280
03400 DNA repair and recombination proteins [BR:
nul03400
]
R1T42_08280
Enzymes [BR:
nul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R1T42_08280
Transcription machinery [BR:
nul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R1T42_08280
DNA repair and recombination proteins [BR:
nul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R1T42_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WOI21679
LinkDB
All DBs
Position
complement(1860738..1861730)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSIRIE
GVDHEFSTIEGVVEDVTEIILNFKQIRFRRQIDEVDSEVVNVSFSGKDTFTAGDMQKYIS
GFQVLNPEMVICNTESSVSLNLELTIEKGRGYVPAEENKNPNAAIGTIAIDSIFTPIKNV
KYSIENYRVEQKTDYEKLVFEISTDGSIHPKQALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMELSVRALNCLKAAEVETLGDLVSYNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDRD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattaaatttccaaaagccggataaagtaatcatgattgattctactgatttt
gaaggtaaattcgaattcagacctttagagccaggatatggtcttactgtgggaaatgct
cttcgtagagtattactttcatcacttgaagggtttgctattacttctatacgtatagaa
ggtgtggatcacgaattctcaacaatcgaaggagtagttgaagatgttactgaaatcatt
ttaaatttcaagcagattagattcagacgtcagattgatgaagttgatagtgaggttgta
aatgtttctttctcaggaaaggatacctttaccgctggagatatgcagaagtatatttca
ggttttcaggttttgaatcctgaaatggttatctgtaatacagaatcatctgttagtctt
aatttagaattaactattgagaagggtagaggatatgttccagctgaagagaataagaat
cctaacgcagctattggtacaatagctattgattctatctttactcctataaagaatgtc
aaatatagtattgaaaactatcgtgtagaacaaaaaactgattatgaaaaactagttttt
gaaatatctactgatggtagtatacacccaaagcaggctttaactgaggctgctaaaaca
cttatccatcacttcatgttgttctctgatgagcgaatcactcttgaagctgatgagatt
gcacaaacagagacttatgatgaagaaagccttcacatgagacaattgcttaagactaaa
cttgtagatatggaactttctgtacgtgcattaaattgtcttaaagctgctgaagttgaa
acactaggtgatttagtttcttacaataagaatgatttgatgaaattcagaaacttcggt
aagaaatctttaactgagcttgaagaacttgtgaacgttaaaggacttaacttcggtatg
gatttatcaaaatataaacttgaccgtgactag
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