Nonlabens ulvanivorans: R1T42_09040
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Entry
R1T42_09040 CDS
T09493
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul00470
D-Amino acid metabolism
nul00550
Peptidoglycan biosynthesis
nul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R1T42_09040 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R1T42_09040 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nul01011
]
R1T42_09040 (murD)
Enzymes [BR:
nul01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
R1T42_09040 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nul01011
]
Precursor biosynthesis
Amino acid ligase
R1T42_09040 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
Pyr_redox_2
AlaDh_PNT_C
DAO
FAD_oxidored
GIDA
HI0933_like
NAD_binding_8
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
WOI21825
LinkDB
All DBs
Position
complement(2002172..2003530)
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AA seq
452 aa
AA seq
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MSWLKTNNKKRIVILGGGMSGVGAAMLATQRGHDVFLSDGGVLKDAFAKALQDQHIPHET
GGHDMEQILNADVVVKSPGIPDNATIVQKILEANIPVISEIEFASRFTDEVEIAITGSNG
KTTVTSLVGHILQIADFDVSVGGNIGQSYAAQVAEAPAKYRVLEVSSFQLDGIKTFKPKI
AVLLNITPDHLDRYDYKFENYVASKLRIAMNQDENDFLIYNADDPAIIEALKIHKPKSKL
VPFSMQKQLDFGAYIQDHNININLDTNLFTMPIQNLSIKGQHNTANAMAAATTAKLLQIR
KETIRQSLASFQGVEHRLEQVLKINKVQYINDSKATNVNATYYALDSMEKPTVWIVGGVD
KGNDYSELYALVNKNVKAIVCLGTDNSKIVEAFGSCVDNMVETSSMEDAVRVAYKLAGPG
DNVLLSPACASFDLFENYEDRGRQFKNAVRAL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttgaaaacaaataataaaaagcgtattgtcatattgggtggcggcatgagt
ggcgtaggtgctgctatgctggcaacgcaacgaggacatgatgtttttttaagcgacggt
ggtgttttgaaagatgctttcgcgaaagcgttacaagatcaacatatcccacatgagact
ggtggacacgatatggagcaaatcttaaatgcagatgttgtagttaaaagtcctggtata
cctgacaacgctacaattgttcaaaaaattctagaggctaatattcctgtgatttctgaa
attgaatttgcttcaagatttacagatgaggtagaaatagctataaccggtagtaatggt
aaaactacagttactagtttagtaggtcatatacttcaaatagcagattttgacgtctcc
gtaggtgggaatataggacaaagctatgctgctcaagttgcggaagcaccagctaaatat
agagttctagaggtgagtagctttcagctagatggtataaaaacctttaaacctaaaata
gctgttttattaaatattacgccagatcatctcgatagatacgattacaaatttgaaaat
tatgtagccagtaaattgcgcattgccatgaatcaagatgagaatgattttcttatctac
aatgctgacgatcctgctataatagaagctctcaaaattcataagcccaaatcgaaatta
gttccattcagcatgcagaagcagctagattttggagcatacatacaagaccataatatc
aacattaacctagacacaaacctttttactatgcctattcaaaatttatccattaaagga
cagcacaatacagcaaacgcgatggcagcagccactaccgcaaaattgcttcaaatccgt
aaagaaaccataagacaaagtttagcttcttttcaaggagttgagcatcgtctagagcaa
gttttgaaaattaataaggtacagtatatcaatgattcaaaggctaccaacgtaaatgca
acttattatgcattagatagtatggaaaagcctacggtatggattgtaggtggtgttgat
aaaggtaacgattacagtgagttgtatgcattagtaaataaaaatgtgaaagctatagtt
tgtctaggaactgataattcaaaaattgttgaggcatttggtagttgtgtagataatatg
gttgaaacatcttctatggaagatgcagtacgtgtcgcatataaacttgcaggtcctgga
gataacgttttattatcacctgcctgcgccagttttgatctatttgaaaattatgaagat
cgtggaagacaatttaaaaatgcagtgagagcactataa
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