Nonlabens ulvanivorans: R1T42_10145
Help
Entry
R1T42_10145 CDS
T09493
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
nul
Nonlabens ulvanivorans
Pathway
nul02020
Two-component system
nul02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R1T42_10145 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R1T42_10145 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nul03021
]
R1T42_10145 (rpoN)
Transcription machinery [BR:
nul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R1T42_10145 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Dam
HTH_12
HTH_38
HTH_IclR
MarR
Clp_N
Motif
Other DBs
NCBI-ProteinID:
WOI22029
LinkDB
All DBs
Position
2239321..2240778
Genome browser
AA seq
485 aa
AA seq
DB search
MLRQSLNFKLSQKLSPQQIQLMKLIQLPTQAFEQRVKQELEENPALDDSKDSLDDDYDEF
SNQDEYGDENDTIEADINVDEYLSDDDIPEYRTQANNYSADDDEKSIPYASGTSFTQSLT
DQLNTRRLSEQHYGIAQFLVGSIDNSGYIRRSMEDIADDLAFTMNIYTDVLEVEQVLKVV
QQLDPAGVGARDLQECLLIQLSRKRNNESTELAMKLVGESFDAFSKKHYKKILEKYHIDE
DELRDAIEEIEHLNPKPGSAYAGGSTRMVEQVVPDFTIRIKDGELELTLNGRNAPELHVS
RDYSNMLKGYKEAKEKSKSQKDAVMFIKQKLDGAKWFIEAIKQRQETLFMTMSSIMYYQK
EYFLTGDERNLRPMILKDIADEIGMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMTNSD
GEEVSTREIKKILETVIGEESKRKPLTDRKLAELLKEKGYPIARRTVAKYREQLDIPVAR
LRKEI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcttagacagtcgttaaatttcaagctatcacaaaagctttctcctcaacaaatccag
ttgatgaagttgattcaattgcctacacaggcatttgaacaacgtgttaaacaagagtta
gaagagaatcctgccctagatgatagtaaagacagtctagatgacgattatgatgagttc
tctaatcaagatgaatatggggacgagaacgacactattgaagcagatatcaacgtcgat
gaatacctaagtgatgatgatataccagaatacagaactcaagcaaataattacagtgca
gatgacgatgagaaaagtattccatatgcctctgggacatcatttacacaatctttaact
gatcaattaaatacaagaagattaagcgagcaacactatggaatagctcaatttttagta
ggtagcatagataatagtggatacatccgtagatccatggaagacatcgcagacgacctc
gcttttaccatgaacatctacacagatgtcttagaagttgaacaagttctaaaagtggta
caacagctagatcctgctggtgtaggagctcgtgatttacaagagtgtttattaattcag
ctttcgcgaaagcgtaataatgaaagcactgagctagcgatgaagttagtaggtgaatca
tttgacgcatttagtaaaaagcattataaaaaaatactagaaaaataccatattgatgaa
gatgagctgcgtgatgctatagaagaaatagaacacttgaatcctaaacctggtagtgcc
tatgctggtggtagcaccagaatggtggaacaagtagttcctgattttacaattcgtatt
aaagatggtgaattagaacttactttgaatggtcgtaacgcgccagaattgcatgtctct
agagattactctaacatgttaaaaggttacaaagaggctaaagaaaaaagtaaatcccaa
aaggatgccgttatgttcattaaacaaaagttagatggcgcaaaatggtttattgaggct
attaaacaacgtcaggaaacactttttatgactatgtcctctattatgtattatcagaaa
gaatatttcttaacaggtgatgaacgtaatttaagaccgatgattcttaaagatattgca
gacgaaataggaatggatgtgtcaaccgtatcacgagtagcaaattctaaatatgttgac
acaccttacggtactaaattgattaaagaattcttttctgaatccatgaccaattctgat
ggtgaagaagtatctactagagaaattaaaaaaatactagaaaccgttataggtgaagaa
agtaagagaaagccattgaccgatcgaaaactagcagaactgcttaaagaaaagggatat
cctatagcaaggcgtactgttgcaaaatatagagagcaattagacattcctgtcgcacgc
ttacgcaaggaaatttaa
DBGET
integrated database retrieval system
