Nonlabens ulvanivorans: R1T42_10715
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Entry
R1T42_10715 CDS
T09493
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul03030
DNA replication
nul03430
Mismatch repair
nul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R1T42_10715 (dnaE)
03430 Mismatch repair
R1T42_10715 (dnaE)
03440 Homologous recombination
R1T42_10715 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nul03032
]
R1T42_10715 (dnaE)
03400 DNA repair and recombination proteins [BR:
nul03400
]
R1T42_10715 (dnaE)
Enzymes [BR:
nul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R1T42_10715 (dnaE)
DNA replication proteins [BR:
nul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R1T42_10715 (dnaE)
DNA repair and recombination proteins [BR:
nul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R1T42_10715 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
PG_binding_5
FaeA
Lipase_GDSL_3
Motif
Other DBs
NCBI-ProteinID:
WOI22138
LinkDB
All DBs
Position
2376770..2379892
Genome browser
AA seq
1040 aa
AA seq
DB search
MYLNNHTYYSLRYGTFNEQDLIELALENGVKTIVLTDINNTSACLNFIRLCAQHQLHGVL
GIDFRNNHHQQYVGIAKNNDGFQELNTFLSYHLENKIPFPSEPQAFDNVYLIYPFDKAIE
LDKVRFRESEFIGISTTTLRKMPFTSYVNMLDKMVVMQTVSFRSKKDYNAHRLLRCIDLN
ILLSQLPESQQGNVEQQMIPVSQLKKVFKEYPIILQNTTQLLSQCHVSFNFENAQLNANQ
QVYSTSKEADYAKLRKLAYEGIKDRYGDREDKTVVIERIEKEIGIVHKKGFVAYFLINWR
ICEYARSKGFFYVGRGSGANSILAYLLKITEVDPIELDLYFERFINDYRTSPPDFDIDFA
WDDREDITRFIFNEFNNVALLATYNTFQYRAVVRELGKVFGLPKTDIDMLTTGHFQLEQL
DQMHQLVLKYSHLIKGMPNYTSIHAGGILITEKPIHYYSATSLPPKGYRTVQFDMHIAED
AGIHKFDILAQRGLGKIRDTIEIIKYNQPDATIANLQTDVKKFMLDPEINNMISQAKCIG
CFYIESPAMRMLLSKLATNDYIGLVAASSVIRPGVAQSGMMREFILRTRYPEKRKEAHPI
MQEIMPETYGIMVYQEDVIKVAHYYAKLDLAEADVLRRGMSGKYRSREEFQKVEQKYFKN
CIDIGHDPKQTQEIWNQIKSFAGYAFAKGHSASYAVESYQSLYLKRYFPLEYMVATLNNG
GGFYRPELYVHEAKMCGATIESPCVNHSDIANTIKGTSIYLGYSYLKELEKKTMIRIIEA
RHLNGVFKFLEDFIDRVLISIDQLALLIRIDAFRFTGIDRYELLWHAHFKLDKSPQKYIQ
NKLFVTEHQEASIPRLHTTALEMAYEQIELLGFPLCSHFDLLLEPPQNHYGRTEMIAHHN
KMILMYGYVVNIKTTHTAKGKRMQFGTFLDINGDFFDTVMFPPVASKISFRGSGIYKIYG
KVVEEFDFFSIEVHNMHKADYIQDPRYAEENPQTMQRLEKQSNLRDRRMGNGNGYRKLEL
PLEKIKTHQPRVSRKSSKTD
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
ttgtatttaaataatcacacatattactctttgcgttatggcacttttaatgagcaagat
ctcattgaactagccctagaaaatggtgtgaaaacaattgtccttacagatattaacaac
accagcgcctgtttaaattttataagactatgtgcacaacatcaactacatggcgtgctg
ggtatagatttcagaaacaatcatcatcaacaatacgttggtattgcaaaaaacaatgat
gggtttcaagagcttaatacttttctatcgtatcatctagaaaataaaattccatttcct
tcagagccacaagcctttgataatgtataccttatatatccgtttgataaagcaatagag
cttgataaagttcgctttcgcgaaagcgaattcataggtatctctacaaccacattacgt
aaaatgccatttactagttatgtaaacatgctggataaaatggttgtgatgcaaacagta
agttttaggtctaaaaaagactataacgcacatcgcctattgcgctgtatagacctaaat
attcttttgagtcagctaccagagtcgcaacaaggtaatgttgagcaacaaatgattcca
gtttctcaattaaaaaaagtttttaaagaatatccgataatccttcaaaacacgacacaa
ttattatcacaatgtcatgtcagtttcaattttgaaaacgcacaacttaacgcaaatcaa
caagtctacagcactagtaaagaagcagattatgcaaaactgagaaagttagcttatgaa
ggcattaaggatagatatggagacagagaggataagacagttgttattgagcgcatagaa
aaagaaataggtatagtccataaaaaaggttttgttgcatattttttaatcaactggcgc
atctgtgaatatgctcgcagtaaaggatttttttatgtaggtcgtggtagtggtgcaaat
agcattttagcttatttacttaaaatcacagaggttgatccgatagaactagatctatac
tttgaacgttttattaatgactatagaaccagtccaccagattttgatatcgattttgca
tgggacgacagagaagatattacacgctttatattcaatgaatttaataatgtagcgctg
ctagccacttataatacttttcaatatcgagcagtagtaagagaattaggtaaagttttt
gggttgcctaaaacagatatagatatgcttaccactggtcattttcaactagagcaacta
gatcaaatgcaccaactggtattaaaatacagtcatttaataaaaggcatgcctaattat
acaagcatacacgctggcggaattttaatcacggaaaaacctattcattactacagtgct
accagtttaccgcccaaaggttatcgtacggttcaatttgatatgcacattgctgaggat
gctgggattcacaaatttgatattctagcacagcgtggcctagggaaaatacgtgatacc
atagagatcattaagtacaatcaacccgatgcgactatagcaaatctacaaaccgatgtg
aaaaagtttatgctagatccagagattaataacatgatctcacaagcaaaatgcataggt
tgtttttatatagaatcaccagcgatgagaatgctattgagcaaactagccactaatgat
tatataggactggttgctgcaagttctgtcatacgtccaggtgtagcccaaagtggtatg
atgcgcgagtttattttgcgtacacgctatcctgaaaagcgcaaagaagcacatcccatt
atgcaagaaataatgccagaaacttatggtattatggtctatcaggaagacgtcattaag
gttgctcactactatgcaaagctagatcttgctgaggcagatgtattgagacgtggaatg
agcggaaaatatcgttctcgtgaagagtttcaaaaggtggaacaaaagtattttaaaaac
tgtatcgatataggccatgatcctaaacagacacaagaaatatggaatcaaattaagagt
tttgctggttatgcttttgcaaaaggccattctgcatcatatgctgtagaaagttaccaa
agcctttatcttaaaagatactttccactagagtatatggtagccacattaaataatggt
ggtggtttttacaggcctgagctctatgttcatgaagcaaagatgtgtggtgcaactata
gaatcaccgtgtgttaaccatagcgatattgctaatactataaaaggaactagtatctac
ctgggctatagctatctcaaagagctagagaaaaaaactatgatacgcataatagaggct
cgtcatcttaatggagtttttaaattcttagaagatttcatagatcgagtactcataagc
attgaccaattagctcttttgatacgcatagatgcttttagatttacaggaatagatcgc
tatgaattgttatggcacgcacattttaaattagataagtcacctcaaaagtatatacag
aataaattatttgttactgagcatcaggaagcaagtatacccagattacacacaaccgct
ttagagatggcttatgaacaaatagaacttctagggtttcctttgtgctctcattttgat
ttactgttagagccacctcaaaatcattacggccgtacagaaatgatagcacatcacaat
aaaatgatattaatgtatggctatgttgtaaacattaaaaccactcatactgctaaaggc
aagcgcatgcagttcggtacgtttttagacattaacggtgactttttcgatacggttatg
tttcctcctgtggcctctaagatcagctttcgcggaagcggaatctataaaatatatggt
aaggtggtagaagaatttgatttcttttctattgaggtacacaacatgcataaggccgat
tatattcaagatccgaggtatgcagaagagaatccccaaaccatgcaacgtttagaaaag
caatccaacttacgagatcgtagaatgggaaatggtaatgggtatcgtaagctagaatta
cctcttgaaaaaataaaaacacatcaacctagagtatcgagaaagtcaagtaaaactgat
tga
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