Nonlabens ulvanivorans: R1T42_11165
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Entry
R1T42_11165 CDS
T09493
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
nul
Nonlabens ulvanivorans
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nul03019
]
R1T42_11165
03009 Ribosome biogenesis [BR:
nul03009
]
R1T42_11165
Messenger RNA biogenesis [BR:
nul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R1T42_11165
Ribosome biogenesis [BR:
nul03009
]
Prokaryotic type
rRNA processing factors
R1T42_11165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
YjbR
Motif
Other DBs
NCBI-ProteinID:
WOI22223
LinkDB
All DBs
Position
2472112..2473650
Genome browser
AA seq
512 aa
AA seq
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MDKEIIIRSGSTKVDYALTKNGRLVELHQDEDENKFAVSDIFIAKSRKVLSGLNASFVNV
GYEKDGFLHYHDLGPQYLTQFKFTKQILSGRRKNYALKDIKLEKELEKSGSITDVIAPNQ
PILVQVVKEPISTKGPRLSAELSIPGRYVVLVPFSDRISISQKIEDREEKSRLKRLVKSI
KPAGFGVIVRTVAKGKLVAELDQDLQNLITKWENMCAKLHKANFPSKVMTEVSRTNSIMR
DVFNDTYTSIVVDDEEVCSEIKDYLKTIAPHKESIVKYHNPRTPVFEKYGIERQIKTSFG
RTVSMSKGAYLIIEHTEAMHVIDVNSGNRSNKANSQEDTALETNLIAASEIARQLRLRDM
GGIIVVDFIDMRQAENRKKLYEHMRDEMSEDRAKHKILPPSKFGLIQITRQRVRQEMNIK
TREENPDGNGNEIQAPILVIDKIKEELEKHLKNGHKKVTLNAHPFVAAFITKGYPSIRSK
WFMNHKKWIKVSPRDAYTYLEYNFTDKDGKVL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaaattattatccgttccggttctactaaggtcgactatgcacttactaaa
aatggtaggttagtcgagctacaccaagatgaagatgaaaataaatttgcggtaagcgat
atatttattgccaaatctcgcaaggtcttatctggtcttaatgcctcatttgtaaatgta
ggttatgaaaaagatggttttttacactatcatgatctaggaccacaataccttacccaa
tttaaattcacgaagcaaattctgagcggtagacgcaagaattatgcattaaaagatatt
aaactagaaaaggaattagaaaaatcaggtagcattacagatgtaattgcacctaaccaa
cctattctagtacaagtagttaaagaacctatctccacaaaaggacctagattaagcgca
gagctttctatccctggtagatatgtagttctcgttcctttctcagatcgtatttctatt
tctcaaaaaatagaagatcgtgaagaaaagagccgacttaaaagacttgttaaaagtatt
aagcctgcaggcttcggcgttatagtacgtaccgttgcaaaaggtaaactagtagcagaa
ctggatcaggacttacagaaccttatcacaaaatgggaaaatatgtgtgctaaattgcac
aaagcaaatttcccttctaaagtaatgactgaagtcagtcgtactaattcaattatgaga
gatgtttttaatgacacctacacgtctattgttgtagacgatgaagaagtatgttctgaa
atcaaagattaccttaaaactatcgctcctcacaaggagtccatcgttaaatatcacaat
cctcgcacacctgtttttgaaaaatatggtattgagagacaaataaaaacgtcattcggc
cgtacggtttcaatgagcaaaggtgcttaccttatcattgaacatactgaggcaatgcac
gttattgatgttaactctggaaatagatctaacaaagcaaatagtcaagaagacactgct
ctagaaactaatcttatcgccgctagtgaaatagcgcgacaattgagattaagagacatg
ggtggtattatagttgttgactttatagacatgcgccaggcagaaaatagaaaaaaactc
tatgaacacatgcgagatgaaatgtctgaagatcgtgctaaacacaaaatacttcctcct
agtaaatttggattaattcaaatcactagacaacgtgtaaggcaagaaatgaatatcaag
actcgtgaagagaatcctgatggcaatggaaatgaaattcaagctcccattcttgttatc
gataagataaaagaagagttagaaaaacatttaaaaaatggacacaaaaaagtgacgctt
aatgcgcatccttttgttgcggcatttataactaaaggctatccttccatacgttctaag
tggtttatgaatcacaaaaaatggattaaagtatcgcctagagatgcttacacttatcta
gaatacaatttcacagataaggatggtaaagtactctaa
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