Nonlabens ulvanivorans: R1T42_12010
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Entry
R1T42_12010 CDS
T09493
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul00521
Streptomycin biosynthesis
nul00523
Polyketide sugar unit biosynthesis
nul00541
Biosynthesis of various nucleotide sugars
nul01100
Metabolic pathways
nul01110
Biosynthesis of secondary metabolites
nul01250
Biosynthesis of nucleotide sugars
Module
nul_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R1T42_12010 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R1T42_12010 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R1T42_12010 (rfbC)
Enzymes [BR:
nul01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
R1T42_12010 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOI22387
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Position
2648585..2649121
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AA seq
178 aa
AA seq
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MIVKETPLKDCYIIEPPVFGDDRGYFSIRHDKYAFAKAFPNHPPFVLHNESFSSYGVLRG
LHLQKGDAAQAKLVRCVQGKILDVAVDYRPDSPTFLKHFTIELSGDNHKQLLVPRGFLHG
FSVLSDTAIVNYQVDNTYQPETEFGIRYDDPTLNIDWQLPDSAVLLSEKDEKLDFLKL
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaaaagaaactccgttgaaagactgctacatcatcgagccacctgtttttggt
gatgatcgcggttatttcagtattagacatgataaatacgctttcgcgaaagcgtttcct
aatcacccaccatttgtattacataacgagtctttttcaagctatggagtgctgcgtggt
ttacatctacaaaaaggagatgctgcgcaagcaaagctagtgcgttgtgtacaaggtaaa
attcttgatgtagcagtagattacagaccagattctccaacctttttaaaacatttcacc
attgaattaagtggtgataatcataaacaactcttagttcctagaggattcctgcatggc
ttttctgtcctgtcagatacagcaatcgtaaattatcaagtagataacacttaccaacca
gagactgaatttgggatacgatatgacgacccaacgttaaatatagattggcaattacca
gatagtgctgttttactatctgaaaaagatgaaaaattagattttttaaaattataa
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