Entry |
|
Name |
(GenBank) pseudouridine synthase
|
KO |
|
Organism |
nul Nonlabens ulvanivorans
|
Brite |
KEGG Orthology (KO) [BR:nul00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:nul03009]
R1T42_13820
Enzymes [BR:nul01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
R1T42_13820
Ribosome biogenesis [BR:nul03009]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
R1T42_13820
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3068688..3069668)
|
AA seq |
326 aa
MGRGNDGARGKGTGRQGGRDSSSSKGGNRRNAGSTDHRGKSQARGNAPTGKPTTRGGKNQ
VVGTSRTGNPVTKKEYIMRKKSEGAKSKPDDGTIRLNKYISNSGICSRRDADIYIKAGSV
TVNGKPVSEMGYRVKLTDEVKFDGQNIQPYQKQYLLLNKPKGFIAPRKGERASKTVLDLM
QSAGVANLHYVGRLGRQSVGLMLFTNDLEMANKLNNPNLEMRKIYQVALDRSFKHEDLMQ
LRNGIAINGEVIDVKEINYVEDGRNNEIGIEIHSGKDNIVQALFEAVKYEIKVLDRVVLG
GLTKKDLPRGHYRSLTEQEIINLKMI |
NT seq |
981 nt +upstreamnt +downstreamnt
atgggaagaggtaatgatggagcaagaggaaaaggaactggccgccaaggcggcagagat
tcttctagctcaaaaggtggcaacagacgtaatgctggaagcacagaccatagaggaaaa
tctcaagctagaggaaatgcacctaccggaaaaccaacaactcgaggtggtaaaaatcaa
gtagtaggaacatcacgcacaggtaatccagtaacaaagaaggaatatatcatgcgtaaa
aaatctgaaggcgctaagtctaagcctgatgatggaacaatacgattgaataaatatatt
tcaaattctggaatatgcagtcgtcgcgatgcagatatatacattaaagctggtagtgta
accgtaaacggtaaacctgtgtctgaaatgggttatcgtgttaaattaactgacgaagtg
aaatttgacggacagaacatacaaccatatcaaaagcagtatttactacttaataaacct
aaaggttttattgcacctcgcaaaggagaacgtgctagtaaaactgtactagacctaatg
caaagtgctggtgttgctaatttgcactatgtaggacgtctaggaagacagtctgtaggt
ttaatgttatttactaacgacctagagatggctaacaagctcaacaatcctaatctagaa
atgcgcaagatttatcaagttgccctagatcgtagttttaaacacgaggatttaatgcaa
ttacgtaatggaatcgctatcaacggcgaagtcattgatgtaaaagaaattaactatgta
gaagatggacgtaacaatgaaatcggaattgaaatacatagtggaaaagacaatatcgtt
caggccttatttgaggcagttaaatatgaaattaaagttttagatcgcgttgtactaggt
ggattgactaaaaaagaccttccacgtggtcactaccgttctttaacagagcaagaaatc
atcaatttaaagatgatataa |