Nonlabens ulvanivorans: R1T42_14000
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Entry
R1T42_14000 CDS
T09493
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul00550
Peptidoglycan biosynthesis
nul01100
Metabolic pathways
nul01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R1T42_14000 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R1T42_14000 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nul01011
]
R1T42_14000 (mrdA)
Enzymes [BR:
nul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
R1T42_14000 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nul01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
R1T42_14000 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WOI22772
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All DBs
Position
3105732..3107642
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AA seq
636 aa
AA seq
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MKRLLFFFLVTIVGLTLIGRVFYLQIIKGDSYKLKSELNAVKSIYDIPERGFIYDRDGDL
MVANQVAYDIMMIPKELKKFDTLQLCTLLQMDKTRLKSKIQDAKDWSWQKGSVIVPQLTQ
EEFAPLQEKLRKFPGFYAQKRSLRKYMVDHSASVLGYIREVSPEKIKKDPRYQSGDLSGK
AGIELQYEQELRGKKGVKHFIRDHYGRPKESYENGRYDTIPNSGLDLTVTLDNDLQAYAE
LLMKNKRGGIVAIEPQTGEILTLVTAPYYDPALLMGRDRSKNSVLIFNDTIKKPGVNRAL
QAEYAPGSPFKVINALVGLQEGVITTTEKLRCNHGYDYGGRKPLGCHSHQSPLALNTGIA
ESCNAYFAQVYRRIIEKGSTPEEGMDNWNRHVTSFGLGDYLGYDLPVGRAGLIPDGKYYS
SRYKYKWYAPTTISNAIGQGEVITTPIQLANMTAAIANRGYFYRPHIIKAIDGEPIDNPD
YTVKNYTTVEARHFEPVVEGMTAVYKTGTAKYAQIPGIEICGKTGTVENFVKIDGKRTQL
TDHSVFIAFAPKDNPQIAIAVFVENGYWGSRYAAKIASLLIEKHIKGEITRKDLEEYLLT
HSLEYEYEKQYSGEPFEINPKVDKGLIAPQPNALNP
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattattattctttttcttagttaccatagtgggacttactttgataggtagg
gttttctatcttcaaataattaagggtgattcatataagcttaaatcagaattaaatgct
gttaaaagtatttatgacatcccagaacgaggctttatttacgatcgtgatggagattta
atggttgcaaaccaagtcgcttacgatatcatgatgattcctaaggaacttaaaaaattt
gataccctacaattatgcacgttattgcaaatggataagactagattaaagtctaaaatt
caggatgcaaaagattggtcatggcaaaaaggaagcgtaatcgttcctcaactcacacaa
gaagagtttgcgcccttgcaagagaaattacgtaagttccctgggttttatgctcagaaa
agatccttgcgtaaatatatggtagatcatagcgctagtgtattgggctatatacgtgag
gtaagtcctgagaaaattaaaaaagatcctcgatatcaatctggagatttatctggtaaa
gcaggaattgaactccaatatgagcaagaattaagaggtaaaaaaggagtgaaacacttt
ataagagatcactatgggcgacctaaagaatcttatgaaaatggtagatatgataccata
cctaattctggattagaccttacggtaacattagataatgacttgcaggcatatgcggaa
ttattgatgaaaaataaacgaggtggaatagttgcgattgaaccacagactggtgaaatt
ctaactctagttactgcaccatattatgatcctgcactgttgatgggacgtgatcgttct
aaaaactctgttctgatttttaatgatactataaaaaaacctggcgttaatagagctctt
caggcagagtatgcaccaggctcaccttttaaagttattaatgcgttagtaggtctacaa
gaaggtgtaataacaacaacggagaagttgaggtgtaatcatggatatgattatggcggt
agaaaaccattaggatgccatagtcatcaatcacctcttgctttaaataccggtattgcc
gaatcatgtaatgcttattttgcacaggtttaccgacgtattatagaaaaaggaagcact
cctgaagaaggaatggataattggaataggcatgttactagttttggtctaggggattat
ttaggttacgatcttccggtaggtcgagcaggattaataccagatggcaaatactattct
agccgatataaatataaatggtatgcacctactacgatttcaaatgcgatagggcaaggt
gaggtaatcacaacacctatacaactggctaatatgacggctgcgatagcaaatcgtgga
tatttttatagaccacatattattaaagctattgatggcgaacctattgataatccagat
tatacagtaaaaaattacaccaccgttgaagctcgacattttgaaccagtagtggaagga
atgacagccgtttataaaactggaacagcaaagtatgcacaaatcccaggaatagaaatt
tgtggtaagactggtaccgtagaaaactttgttaagattgatggtaaacgcacacaactt
acagatcattccgtatttatagcttttgcaccaaaggataatcctcaaatagcgattgca
gtatttgttgaaaatggttattggggttctcgatatgctgcaaagattgctagtttactc
attgaaaaacatatcaaaggtgagattactcgtaaagatttagaagaatatttacttacg
catagcttagagtatgagtatgaaaagcaatatagtggcgagccctttgaaataaaccct
aaagtggataaaggccttattgcaccacaacctaatgctttaaatccgtaa
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