Nitrosomonas ureae: ATY38_04450
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Entry
ATY38_04450 CDS
T04188
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
nur
Nitrosomonas ureae
Brite
KEGG Orthology (KO) [BR:
nur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nur03021
]
ATY38_04450
Transcription machinery [BR:
nur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ATY38_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Tudor_RapA
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_22
Helicase_C_2
Flavi_DEAD
UDG
AAA_34
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ALQ50554
UniProt:
A0A1H2DUQ3
LinkDB
All DBs
Position
942553..945480
Genome browser
AA seq
975 aa
AA seq
DB search
MHDFKPGQRWICDVDLQLGLGTVQNVEHRIVTITFSSAGEIRSYAKHSAPLTRVVFKADD
VVSSQAGLTLKVTHANERNGLIVYSGVSEGGDSLELAEEQLAHHLLLNRPAERLFAGQFD
QDKWFRIRYQTLLIRNRMAQTPLYGLVGTRTNLIPHQLYIAHEVGRRFAPRVLLADEVGL
GKTIEAGLILHQQLLTERAKRVLIVVPETLIHQWLVEMLRRFNLQFSIFDEARCLSMEES
DEDEENGKDEQGENPFQSEQLVLCSVHFLRQNPKRFQQALEGRWDLLVVDEAHHLHWSPQ
AASPQYAMIEQLAMCTRGVLLLTATPEQLGKASHYARLRLLDPHRFSSFSEFVTEEQSYE
PIAQAVETLLEGQALTAEIGQRIADTLDSDQAQALIAQLQDSSADQAQIGQARNKLAELL
LDRHGTGRILFRNTRAAVKGFPARKLVAYPLPIPAEYLPCLVTFESTPLSKPQLLLCPEL
IYQVRCEDDQPYWSEIDPRVDWLIATLKRVKPEKVLVIAANAQTARDLAQALKQTTGQFI
PVFHESMSLIERDRAAAFFADKETGGQVLICSEIGSEGRNFQFAHHLVLFDLPLNPDLLE
QRIGRLDRIGQTDTIQIHVPYLENSALAVMFHWYHEGLNAFEKTCPAGQTVFVKVEEQLI
TALHQRQTQAEMLAGLIGVTQTAHRELNEALDRGRDKLLEYNSFRPIAAEQLTQAARAQD
NDPLLPQYMETVFDCCGVHIEDHRSGSFLIEPSEHMSMPFPGLQDEGSIITYSRDVALSN
EDVHFLTWEHPMVTHAMERILSHENGNAVVAMLKHKRVQPGTLLLETLFVLEASGHNVQQ
SNRYLPPAVIRILLNEQSSGDYPYLDHDSVNQHLQPVATGIAKQVIQLKEDTIRELLTVS
EQQASAQAPQLISAAEKRIQQTFAPEIERLKALQQVNPNVRDEEIQFFEQQLQQLTGALK
SSNLRLDAVRVIVAT
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcacgattttaagccgggtcaacgatggatctgcgatgttgatttacaattgggactg
ggcacggttcagaatgttgagcataggattgtcactatcactttcagctcggcgggtgag
atccgttcctatgccaaacactccgcgccattgacacgcgtggttttcaaggcagacgat
gttgtcagtagccaagcgggtcttacattgaaagtgactcacgccaatgagcgcaatgga
ttaatcgtctattcgggcgttagcgaaggcggagatagcctggaacttgccgaagagcag
ctagcacaccacttactattgaaccgtccggcagaacgcttgttcgcgggtcagtttgat
caggacaaatggttcaggattcgctatcaaacactgctgatccgtaaccggatggcgcag
acaccgctgtacggtctggtgggcacgcgcactaacctcatcccgcaccaactgtacatc
gcccatgaagtgggccgccgctttgcgccgcgggtgttattggccgatgaagtcgggctg
ggaaaaaccatcgaggccggattgattttgcatcagcaattgctcaccgagcgtgccaag
cgcgtgctcatcgtggtgccggaaaccttgatccaccaatggctggtggaaatgctgcgg
cgtttcaatctgcaattcagcattttcgacgaagcgcgctgtttgtctatggaagaaagc
gatgaagacgaagaaaacgggaaagatgagcaaggcgaaaatccgtttcaaagcgagcaa
ttggtgctgtgcagtgtgcattttctgcggcaaaatccgaagcgttttcagcaagcattg
gaaggtcgctgggatttgctggtagtcgacgaagcgcatcatttgcactggtcgccacaa
gccgccagcccgcaatacgccatgatcgagcaattggccatgtgcacccgtggcgtgctg
ctgttaaccgcgacgccggaacaattgggcaaagccagtcactacgcccgcctgcgcctg
ctcgacccgcaccgtttcagcagtttttccgagtttgtcaccgaagagcaatcgtacgaa
ccgatcgcccaagcggtcgaaaccttgctcgaaggccaagcattaaccgctgaaatcgga
cagcgcatcgccgatacgctcgattccgatcaagcgcaagctttaatcgcgcaattgcaa
gattcttcggcggatcaagcgcagatcggacaagcccggaataaactcgcggaattattg
ctcgaccggcacggtaccggacgcattctgttccgcaacacccgcgcggcggtcaaagga
tttccggcacgcaagctggtcgcctatccgctgccaataccggcggaatatctgccctgc
ttggtaacatttgaatccacgcctttatccaagccgcaattgctgctatgcccggaattg
atctaccaagtgcgatgcgaagacgatcagccatactggagcgaaatcgacccgcgcgtg
gattggttgatcgccacactcaagcgggtaaagccggaaaaagtgctggtcattgccgcc
aacgcgcaaaccgcgcgcgatctggcgcaagcgctgaaacaaaccaccgggcaatttatc
ccggtatttcacgaaagcatgagcctgatcgaacgcgaccgcgccgcggcgttctttgcc
gacaaggaaaccggcggccaggtgctgatctgctcggaaatcggcagcgaaggccgcaat
ttccagtttgcgcatcatctggtgttgttcgacctgccgctcaatcccgatctgctcgag
cagcgcatcggccggctcgatcgcatcggccagaccgacaccatccaaatccacgtaccc
tacctggaaaacagcgcgctggcagtgatgttccattggtatcatgaaggcttgaatgcg
ttcgaaaaaacctgcccggccggtcaaacggtatttgtgaaagtcgaagaacagctcatc
accgcattgcatcagcgccaaactcaagccgaaatgctagccggattaatcggcgttacg
caaacggcgcaccgggaattgaacgaagcactcgaccgcgggcgcgacaaattattggaa
tacaactcgttccggcccatcgccgcagaacagctcacacaagccgcgcgcgcgcaggat
aacgatccgctgctgccgcaatatatggaaacggtattcgattgctgcggcgtgcatatc
gaagaccaccgcagcggcagctttctgatcgaaccgagcgaacacatgagcatgccgttt
cccggcttgcaggatgaaggttcgatcatcacctattcgcgcgacgtggcgctgagcaat
gaggatgtgcattttctgacctgggaacacccgatggtcacgcacgcgatggagcggatt
ctgagccacgaaaacggcaacgccgtggtggccatgctgaaacacaaacgcgtgcagccg
ggcaccttgctgctggaaaccctgtttgtgctcgaagcgagcggacacaacgtgcagcaa
agcaaccgctacctgcctcccgccgtgattcgcatcctattgaatgagcaaagcagcggc
gactatccgtatctcgatcacgattcggtcaatcaacacctgcaaccggtcgcgaccgga
atcgccaaacaagtgatccaactgaaagaagacaccatccgcgagctgctaaccgtcagc
gaacaacaagccagcgcgcaagccccgcaactcatctccgcagccgaaaagcgcatccag
caaactttcgctccggaaatcgaacgtctcaaagcgctgcagcaagtcaacccgaacgtg
cgcgacgaagaaattcaattcttcgagcaacaattgcagcaactgaccggtgcactgaaa
tccagcaatctgcggcttgatgccgtgcgggtgattgtggcgacgtga
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