Nitrosomonas ureae: ATY38_05010
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Entry
ATY38_05010 CDS
T04188
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nur
Nitrosomonas ureae
Brite
KEGG Orthology (KO) [BR:
nur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nur03032
]
ATY38_05010 (gyrB)
03400 DNA repair and recombination proteins [BR:
nur03400
]
ATY38_05010 (gyrB)
Enzymes [BR:
nur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ATY38_05010 (gyrB)
DNA replication proteins [BR:
nur03032
]
Prokaryotic type
DNA Topoisomerases
ATY38_05010 (gyrB)
DNA repair and recombination proteins [BR:
nur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATY38_05010 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALQ50647
UniProt:
A0A0S3AHI9
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All DBs
Position
1072108..1074528
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AA seq
806 aa
AA seq
DB search
MSDQNPQVPKENPANYDSESIKILKGLDAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAID
EALAGHCDEITVTIHPDNSVSVLDNGRGIPTGIKQDDEMKRSAAEIVMTELHAGGKFDDN
SYKVSGGLHGVGVSVVNALSEWLKLTIRRDSKTHQIEFRMGVPVKPLEITGESERHGTEV
HFLASKEIFGNIEYHYDIFAKRLRELSFLNNGVKIHLIDQRTGKDEKFAFTGGIRNFVEY
INRSKTVLHPSIFYSTGVKDNIAVEVSMQWNDSYTEQVLCFTNNIPQKDGGTHLTGLRAA
MTRTLNNYIEKNELAKKAKVETSGDDMREGLSCVLSVKLFEPKFSSQTKEKLVSSEVRPV
VEEVVTQKLSEYLLENPLDAKTICNKIIDSARAREAARKARELTRRKGVLDSMGLPGKLA
DCQEKNPALCELYLVEGDSAGGSAKQGRDRKFQAIMPLKGKILNVEKARFDKLISSQEII
SLITALGTGFGKDEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIY
IAQPPLYKIKHGKKERYVKDDHELKQHLLSLALTDAELYIGEERPSLSGETLEKIANEYI
LAEAVIERMSQMIDSNVMYALLRQPDVDLHNEQAAIDSATRLAARIKDVEIVAEYDDVHE
RYRLKIMRMSHGNVLTSYLDNDFVESGDYVQIQKTAQVFEGLLGQGAYIRRGERKQAINE
FKHALEWLLEEAKKGLNVQRYKGLGEMNPSQLWETTMDPENRRLLRAQIEDSILTDEIFT
TLMGDVVEPRRAFIEKNALRATNIDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaaaatccccaagtacccaaagaaaatccagccaattacgattctgaaagc
atcaaaatactcaaaggtctggatgccgtacgtaaacggcctggcatgtatattggcgat
accagcgatggtacaggtttgcaccacatggtattcgaagttgtcgataacgccattgac
gaagcactagccggccattgcgatgaaataaccgttactatccatccggataattcggtc
agcgtgctggacaacggtcgaggcattcccaccgggatcaaacaggacgatgaaatgaaa
cgctcagcggcggaaatcgtcatgacggaattacacgccgggggaaagttcgacgacaat
tcatacaaagtttccggtggtttacatggtgttggcgtatcagtagtcaatgcattatca
gaatggttgaaactcacgatcaggcgtgatagcaagacgcaccagatagaatttcgtatg
ggtgtcccagtcaaaccattggaaattacaggagaaagtgaaaggcacggtacggaagta
cattttcttgccagtaaggaaattttcggcaacattgaatatcattatgatattttcgcc
aaacgtttgcgtgaactttcgtttctcaataacggagtaaaaattcatctgatcgatcaa
cgtactggtaaggatgaaaaattcgcctttaccggcggtattagaaactttgttgaatac
atcaatcgcagtaagacggtgctgcacccgagtattttctactcaacgggtgtaaaggac
aatattgccgtcgaggtatcgatgcaatggaatgacagttacaccgagcaagtactgtgc
tttaccaacaatattccgcaaaaagacggtggtactcacttgacgggcttgcgcgctgca
atgacacgtacacttaacaattacattgaaaaaaatgagctggccaaaaaagccaaggtt
gaaacttccggtgatgatatgcgtgaaggcttgtcgtgcgtattatcggtgaagctgttt
gaacccaaattttcgtcgcaaaccaaagaaaaattggtatcttcggaagtgcgccccgta
gtggaagaagtcgtaacgcaaaagctgtctgagtacttgcttgaaaatccactggatgcc
aaaaccatttgcaataaaattattgattccgcccgagcccgcgaagctgcccgtaaggcg
cgtgaactgacacgccgcaaaggtgtgctcgatagtatgggattaccaggaaaactggct
gattgccaggaaaaaaatccggcattgtgcgaactctatttggtcgagggtgattccgcc
ggtggttccgccaaacaggggcgcgatcgtaaattccaggcgatcatgccactcaagggg
aaaatcctgaatgtcgaaaaagcgcgttttgacaagctgatttcgtcgcaggagatcatt
tctttgatcaccgcgttgggaaccggtttcggtaaggatgaatacaacccggataagctg
cgttatcaccgtattatcatcatgactgacgcagacgtggatggttcgcatatccgcact
ttgctgttaaccttcttttaccggcaaatgcccgaactgatcgagcgcggtcatatttat
atcgcgcaaccgcctttgtataaaatcaaacacggtaaaaaagaacgctacgtcaaggat
gatcatgaattaaaacaacatctgctcagcctcgcgttaaccgatgccgagctgtatatc
ggggaagaaaggccctccttgagcggtgaaacactggaaaaaattgccaacgaatacatt
ttggcggaggcggttatcgagcgcatgagtcagatgatcgatagtaacgtaatgtacgcg
ttgttgcgccagccggacgtcgacttgcacaacgaacaagcggcgattgatagcgcgacc
cgtctggccgcacgtatcaaggatgtggaaatcgttgcggaatacgatgacgtgcacgag
cgttatcgattgaaaatcatgcgcatgtcgcatggtaatgtgctgaccagctacctggat
aatgattttgtagagagtggcgactatgtgcagatccagaaaactgcacaggtatttgaa
ggtttgctgggtcaaggtgcttacattcgacgcggtgaacgcaagcaggctattaacgaa
ttcaaacatgcgctcgaatggttgttggaagaagcgaaaaaaggtctgaacgtacaacgc
tacaaaggcctgggggaaatgaatccaagtcaattgtgggaaactacgatggatccggaa
aaccgccgcctgctacgcgcgcagatcgaagacagtattctgaccgacgaaatcttcacc
acgctaatgggcgatgtggtcgaaccacggcgggcattcatcgagaagaatgcactacgg
gcgacaaatattgatatttag
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