Nitrosomonas ureae: ATY38_08665
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Entry
ATY38_08665 CDS
T04188
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nur
Nitrosomonas ureae
Pathway
nur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATY38_08665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nur03021
]
ATY38_08665
03400 DNA repair and recombination proteins [BR:
nur03400
]
ATY38_08665
Enzymes [BR:
nur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATY38_08665
Transcription machinery [BR:
nur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATY38_08665
DNA repair and recombination proteins [BR:
nur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATY38_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALQ51284
UniProt:
A0A0S3AJC3
LinkDB
All DBs
Position
1902454..1903461
Genome browser
AA seq
335 aa
AA seq
DB search
MHGTDLLTPRIIDVQNISPLHAKVVMEPFERGYGHTLGNALRRILLSSMTGYAPTEIKIA
GVLHEYSALDGVQEDVVDILMNIKGIVLKLYNNDEVILSLKKSGKGIVTAADIELSHDVE
IINPEHVIAHLTSEGKIDVQLKVEKGRGYAPANIRKTGINEKNSIGTILLDASFSPIKRV
SYSVESARVEQRTDLDKLIVDIETNGAVEPEEAIRFAARVLVQQLSVFADLESTPIPKEK
PQAPQIDPILLRPVDDLELTVRSANCLKVENIYYIGDLIQRTEAELLRTPNLGRKSLNEI
KEVLASRELTLGMKLDNWPPANLDSVSKENNHATQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcacagatttgctaacgccaagaattattgatgttcaaaatatatcacctctt
catgcaaaagttgtcatggagccctttgagcgaggttatgggcatacattaggaaatgct
ctgcgccgaatactattgtcttctatgacaggatatgctcctacagaaattaaaattgct
ggtgtgttacatgaatattcagcactggatggtgtgcaagaagatgttgttgatatacta
atgaatataaagggtatcgtcttaaaactatataataatgatgaagtaatactttcatta
aagaaatccggtaaaggaattgttactgctgcagatattgaacttagccatgatgtagaa
ataattaatccagagcatgtgattgcacatctcacatcagaaggaaaaattgatgtgcag
cttaaagtggaaaaagggagaggttatgctcctgctaatattagaaaaactggtattaat
gaaaaaaatagtatagggactatattgttagatgcttcttttagcccaattaaacgtgta
agttattcggttgagagtgctcgtgtagaacaacggactgatttagataagctgattgta
gatattgaaacaaatggtgcggttgagcccgaggaagcaatccgttttgctgctcgagtt
ttagttcagcaattatctgtttttgctgatcttgaaagtacccctataccaaaagaaaaa
ccacaagccccgcagatagatcctatactactccggccagttgatgatctagagctaaca
gtaagatcagccaattgtttaaaagttgaaaatatatactatataggcgatttaattcag
agaactgaagctgaattgctgagaacgccaaatttaggaagaaaatcactgaatgaaatt
aaagaagttttagcatcaagagaacttacattaggaatgaaattagataattggccacca
gctaatcttgatagtgtttcaaaggaaaataatcatgcgacacagtaa
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