Nitrosomonas ureae: ATY38_10075
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Entry
ATY38_10075 CDS
T04188
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nur
Nitrosomonas ureae
Pathway
nur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATY38_10075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nur03021
]
ATY38_10075
03400 DNA repair and recombination proteins [BR:
nur03400
]
ATY38_10075
Enzymes [BR:
nur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATY38_10075
Transcription machinery [BR:
nur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATY38_10075
DNA repair and recombination proteins [BR:
nur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATY38_10075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ALQ51530
UniProt:
A0A1H2HIF6
LinkDB
All DBs
Position
2204021..2208223
Genome browser
AA seq
1400 aa
AA seq
DB search
MKALLDLFKQVTHKEEFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVSHIWFLKSL
PSRLGMVLDMTLRDIERILYFEAYVVTDPGLTPLTRCQLLTEEDYLIKTEEYGDDFNASM
GAEGIRDLLSNLDIKAEIENLRREMDSTGSETKIKKISKRLKLLEAFNKSGIKPQWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKKMALELFKPFIFNKLELMGIASTIKAAKREVENETAVVWDILEDVIREHP
VMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEC
RTLMMSTNNVLSPANGEPIIVPSQDIVLGLYYTTREKVGARGEGMLFQDVSEVSRAYESR
NVELNARIKVRIREYDINADGERYEKITRYETTVGRTLLFEIFPPALPFSLLNKTLKKKE
ISKLINASFRRCGLRETVIFADKLMYAGFSYATRAGISICADDMLIPTQKSDIIAEAEQE
VKEIEGQYTSGLVTQGERYNKVVDIWGRAGDQVAKAMMNQLGVEPVLDPSSGKIQLGETG
TQLTQESFNSIYMMADSGARGSAAQIRQLSGMRGLMAKPDGSIIETPITANFREGLNVLQ
YFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEEDCNTGSGVVMKALVEGGEI
IEALRERILGRVVVNDVINPETQEVVFASGVLLDEDAVDLIESLGIDEVKVRTPLTCETR
YGLCAKCYGRDLGRGTPVNVGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRTAVVSQVE
SKSSGTVHYSSTMRYVTNAQNELIAISRSGEIIIQDENGRERERHKASYGATLLVRDGEM
VKAGQVLTTWDPHTRPIITEYTGKVRFENVEEGVTVAKQIDEVTGLSTLVVIDPKRRGVI
QSKGLRPLVKFLDDDGNEIKMLGSNQSVSITFQIGCIITVRDGQEVSVGEVLARIPQETS
KTRDITGGLPRVAELFEARAPKDAGMLAEVTGIVSFGKDTKGKQRLIITDLEEIVHEYLI
PKDKHVMAHDGQVVNKGENIVDGPADPRDILRLQGVEALARYITDEVQDVYRLQGVRIND
KHIEVIVRQMLRRVQIANAGDSTFIPGEQVERADLLVENERLIAEKKMPATYEFMLLGIT
KASLSTDSFISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLVPAGTGLSFHSKRK
KQEKIPEIITESGTSIDSAV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcactgctagatctatttaaacaagttactcacaaagaagagtttgatgccatc
aaaattggccttgcttctccagagaaaattcgctcttggtcttatggtgaagtaaaaaaa
cctgagacgattaattatcgtaccttcaaaccggagcgagatggtctgttttgtgccaag
atctttggccccgttaaagattatgaatgcttgtgcggaaaatataagcggctaaagcat
cgtggtgtcatttgcgagaaatgcggtgttgaagtaactttgtcgaaagtacgccgtgaa
cgcatgggacatatcgaactggcttcacccgtttcacatatctggtttttaaaatccttg
ccatcgcgcttgggtatggtattggatatgactttacgtgatattgaacgaattctatat
tttgaagcttatgtagttactgatcctggcttgacgccattaacgcgttgtcagttgctg
actgaagaggattatttaataaaaacagaagaatatggagatgatttcaatgccagtatg
ggtgcagaaggcattcgcgatctattaagtaatctggatattaaagccgagatcgagaac
ttgcggcgtgagatggatagtacggggtcggaaacaaagattaagaaaatttctaagaga
cttaaactgctagaggcatttaataagtcagggataaaaccacaatggatggttttgacc
gtattaccagttttaccaccagatcttcgtcctctggtgccgctcgatggtggtcgtttt
gcgacttcggatttgaatgatttatatcgccgggttatcaatcgtaacaatcggttaaaa
cgattactggaactaaaagcgccggaaattattgttcggaatgaaaagcgcatgctgcaa
gaagcggttgattcattattagataatggtcgtcgaggcaaggcaatgacgggtgctaac
aagcgagcacttaagtcattggcggatatgattaaaggtaaaggcgggcgtttccgccag
aacttgctgggtaagcgtgtggattattctggtcgctcagttatcgttgtcggacctcaa
cttaagcttcaccagtgtggattgccaaagaaaatggcactcgagttatttaagcctttt
attttcaataaactggagttaatgggaattgccagtaccatcaaggctgccaagcgcgag
gttgagaatgaaactgcagtggtatgggatattctggaagatgtaattcgtgagcatccg
gttatgttaaatcgtgcgccgactttgcatcgattgggtattcaagcgtttgagccagtt
ctggtcgagggtaaagcaattcaattgcatccattagtttgtgctgcatttaatgctgat
tttgacggtgaccaaatggctgttcacgtaccgctttcattagaagcacaaatggagtgc
agaacattaatgatgtctaccaataatgttttatccccagctaatggagaacctattatt
gtaccttctcaagatatcgtactcggactttattatactactagggagaaagtgggggct
cgtggtgaaggtatgctatttcaggatgtcagtgaggtttcacgtgcttatgaaagtagg
aatgtagaattaaatgcaagaattaaggtgagaatcagggaatatgacattaatgcagat
ggcgaacgctatgaaaaaattactcgttatgaaacaacggtaggaaggacattattattt
gaaatttttcctccggcacttccgttttcattacttaataaaacattgaaaaagaaagag
atatcaaaacttattaatgcaagttttagacgttgtggattgcgagaaacagtgattttt
gctgataaactcatgtatgcgggatttagttatgcaacgcgtgccggtatttctatttgt
gctgatgacatgttgataccaactcagaaaagcgacattattgctgaggcggaacaagag
gtaaaagaaattgaagggcaatatacatcaggtttggtgactcaaggcgagcgttataac
aaagtcgtggatatttggggtagagcaggcgatcaagtggccaaagctatgatgaatcag
cttggcgtagaaccagtacttgatccgtctagcggaaagatacaacttggcgagacaggc
acgcagttaacgcaagaatcatttaattcaatctatatgatggcggattctggtgctcgt
ggctcagcggcacagatacgtcagttatcaggtatgcgtggattgatggcaaaaccagat
ggctcgattattgaaacaccaattacagctaacttccgcgaaggtttaaatgtcctacag
tattttatttcaacacacggtgccaggaagggactagcagatacggccttaaagactgct
aattcaggttatttgactcgacgattagttgatgttactcaagatcttgtagttacggag
gaagattgtaataccggtagtggcgtagttatgaaagctttagtggaaggtggtgaaatt
attgaagcattacgcgagcgaattttaggtagggttgtagttaacgacgtaattaatcct
gagactcaagaagtggtttttgcttcgggggtattgctggatgaagatgctgtagatttg
attgaatccttgggtattgatgaagtaaaagtccgtacgccacttacttgtgaaactcga
tatggtttatgtgcgaagtgctatggacgggatttggggcgtggcactccggtcaatgtg
ggcgaagcaataggagttattgccgctcaatcaattggtgaaccaggtacgcaattgaca
atgcgtacatttcatattggtggtgcagcatccagaactgcggtggtaagtcaggttgag
agcaaatcaagtggcaccgtacattattcttccacaatgaggtatgtgactaatgctcag
aatgaattgatcgctatttcacgaagcggtgaaatcattattcaagatgagaatggacga
gagcgtgaaagacataaagcctcttacggtgcaacattgttggtgcgggatggtgagatg
gttaaagcgggtcaggtattaaccacttgggatccgcatactcgtcctataataactgaa
tatactgggaaggtgcgattcgaaaatgttgaggaaggtgttactgtagcgaaacaaatc
gatgaggttactggattatcgaccttagtagttattgatccaaaacgtcgaggagttata
caatcgaaaggtttgcgtccactagtgaagttcttggatgatgatgggaatgaaataaag
atgttgggtagtaatcaatctgtgagcataacgttccagatcggttgtattatcacggtg
agggatgggcaggaagtgagtgtcggcgaggtattggcaaggattccacaagagacttct
aaaacacgtgatattacaggaggcttgccgcgcgtggcagagctatttgaagcaagagcg
ccaaaagatgcgggtatgttagctgaggttacgggtattgtttcttttggtaaggacact
aaaggtaagcaaagactaattatcactgatcttgaagaaattgtgcatgaatatttaatt
ccaaaagataaacacgtaatggcgcatgacgggcaagtagtgaacaagggtgaaaatatt
gttgatggaccggcagatccccgtgatatcttgcgtttacaaggtgttgaagcattagcg
cgatatattactgatgaagtccaagatgtatatcgattgcagggcgttaggattaatgac
aaacatattgaagttatcgttcgtcaaatgctaaggcgagtgcaaattgccaatgctggt
gattctacatttattccgggggagcaagtagagcgcgctgatttactcgttgagaatgaa
cgattaattgccgaaaagaaaatgccagctacttatgaatttatgttgttaggtattaca
aaagcatcattatcgacagattccttcatttctgcagcctcattccaagaaacgactcga
gtattgacggaagcggcaattatgggcaaaaaagacgatttgcgcggattaaaagagaat
gttatcgttggcagattagtccccgcgggtacagggttgtcctttcatagtaagaggaaa
aagcaagaaaagatacctgagataattactgaatcaggtacctcaattgatagtgctgtt
tag
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integrated database retrieval system
