Nitrosomonas ureae: ATY38_13825
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Entry
ATY38_13825 CDS
T04188
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nur
Nitrosomonas ureae
Pathway
nur03420
Nucleotide excision repair
nur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATY38_13825
03430 Mismatch repair
ATY38_13825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nur03400
]
ATY38_13825
Enzymes [BR:
nur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATY38_13825
DNA repair and recombination proteins [BR:
nur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATY38_13825
MMR (mismatch excision repair)
Other MMR factors
ATY38_13825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_22
AAA_11
DEAD
ResIII
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ALQ52193
UniProt:
A0A1H2GHP3
LinkDB
All DBs
Position
complement(2979135..2981327)
Genome browser
AA seq
730 aa
AA seq
DB search
MTSLLSDLNPQQLEAITLPHQSVLVLAGAGSGKTRVLTTRIAYLIQSGQVSPSGILAVTF
TNKAAKEMLTRITAMLPINPRGMWIGTFHGLCHRMLRSHYQDAGLPQAFQILDSADQLAL
IKRILKDLSADDKKFPPRQVQWFINNAKESGLRAAYVTIDDVFSRHMLEFYQAYELQCHK
VSAVDFAELLLRSYELLSRNEILCQHYRERFNHILVDEFQDTNPLQYKWLKLLSGTGTKE
AAAVFAVGDDDQSIYAFRGAYSGNMKDFERDFGITKIIKLEQNYRSHGNILDAANALIEN
NSERLGKNLWTAEGRGEPLRVYNAPNDFDEAAFIVEEVKTLHAEGIALSEIALLYRSNAQ
SRVFEHSLFNAAIPYRVYGGMRFFDRQEIKHALAYLRLIANLDDDGALLRVINFPTRGIG
ARSVEQLQEDAKVQGGSLWAAALLKCDGEVSLPQESHKSLKGVAKFVFLIMTMRQSCGEL
ALPQIVECMLIHSELLTHYAKERESSERLENLNELINAATSFVHEAGNDSLAEFLAHASL
EAGEHQVGSDRDALQLMTVHAAKGLEFHTVFLSGLEEGLFPHENSLNESNGIAEERRLMY
VAMTRARRRLYLSFTQSRMLHGQTRYNIASRFLDEIPQTCLKWMQAAPRTSFRYSNSTNP
ISTSASSIQLRSSNSSRGGWKIGQSVMHAKFGTGVIINCEGCGSDARVQVNFDQAGMKWL
SLEYAKLSTV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacttctttattatccgatctgaatccgcagcaactggaagcgattaccttgccacac
caatctgtgttggttttggctggtgccggtagcggtaagacacgcgtattgacgacgcgc
attgcatatctgattcaatcggggcaagtaagtccgagcggtattctggctgttacattt
accaacaaagcagctaaagagatgctgacgcggattaccgctatgctgccgattaatccg
cgcggaatgtggattgggacatttcatggattgtgtcaccgcatgttgcgctcacattat
caagatgcgggtttgccacaagcgtttcagatcttggattctgccgatcaactggcttta
attaagcgcatcctgaaagatttatccgctgacgacaagaaattcccgccgcgccaagtg
caatggtttatcaacaatgccaaggaatctggattacgtgccgcctatgttacgatcgat
gatgttttctcgcgccatatgctcgaattttatcaagcatatgagctgcaatgtcataaa
gtgagtgcagtggattttgccgaattgttgttacgcagttatgaactgctgagccgcaat
gaaatcttatgccagcattatcgggagcgttttaatcatattctggtggatgagtttcag
gataccaatccattgcaatacaaatggcttaaattgctgtcgggtacaggaacgaaggaa
gcggcggcggtttttgcggtcggtgatgacgatcaaagcatttatgcgttccgtggtgca
tacagcggcaacatgaaagactttgagcgtgactttggcatcacgaaaatcatcaagctg
gagcagaattatcgatcgcatggcaatattctggatgcagctaatgcattaattgaaaat
aatagtgagcgtttggggaaaaatctttggactgctgagggaaggggcgagcctctacgt
gtttacaacgcgccaaatgatttcgatgaagctgcatttattgttgaagaagttaaaacc
ttgcatgcggagggcatcgccttatcagaaatagcattgctatatcgctccaatgcacaa
tcacgcgtgtttgaacacagcttgttcaatgctgcaataccttatcgtgtctatgggggt
atgcggttctttgatcgtcaggaaatcaagcatgcattggcctatttacgcttaattgcc
aatctggatgatgatggcgctttactgcgtgtcatcaactttccgacacgtggcataggt
gctcgcagcgtggaacaattacaagaagatgccaaagttcaaggtggcagcctgtgggcg
gcagcattgctgaaatgtgacggtgaagtgtcattgccgcaagaatcgcacaaatcctta
aaaggcgttgccaagtttgtatttctaatcatgacgatgcgtcaatcctgtggcgagtta
gcattgcctcaaattgtggaatgcatgctgattcatagtgagttattgacgcattatgcc
aaagagcgcgaaagttcggaaaggctcgaaaatttgaatgaattaattaatgctgcgacc
agttttgtgcatgaagccggaaatgacagtctggccgagtttctggcgcatgcttcgctg
gaagctggcgagcatcaggtcggcagtgaccgggatgcgctacaactgatgacagttcat
gcagctaaaggattggaatttcacactgtgtttctgagtggattggaagaagggcttttt
ccacatgagaacagcctgaatgagagcaatggcatcgctgaggaaaggcgcctgatgtac
gtggccatgacacgtgctcgccgccggttatatcttagttttacgcaaagtcgtatgcta
catggccaaactcggtataacattgcatcgcgctttctcgatgaaattccgcaaacctgc
ttaaaatggatgcaggcagcaccgaggacctccttccgctactcgaattcgactaatcca
atctctacgagtgcatcaagtatccaattgagatcttctaatagtagtaggggtggatgg
aaaatcggacagagcgtgatgcatgccaaattcggtaccggtgtcattattaattgtgaa
ggttgtggcagcgatgcgagagttcaggtaaattttgatcaagctggaatgaaatggctg
tcgcttgaatatgcaaagttgtcgacagtttaa
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