Candidatus Nitrohelix vancouverensis: G3M78_00135
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Entry
G3M78_00135 CDS
T09852
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva02024
Quorum sensing
nva03060
Protein export
nva03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
G3M78_00135 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
G3M78_00135 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G3M78_00135 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nva02044
]
G3M78_00135 (ffh)
Enzymes [BR:
nva01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
G3M78_00135 (ffh)
Secretion system [BR:
nva02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
G3M78_00135 (ffh)
Eukaryotic Sec-SRP protein
G3M78_00135 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_33
AAA_22
AAA_17
nSTAND3
AAA_28
YqeC
AAA_16
6PF2K
AAA_18
SRPRB
APS_kinase
KTI12
ATP_bind_1
T6SS_Vgr
AAA_14
AAA_31
Thymidylate_kin
AAA_30
Pox_A3L
TsaE
AAA
Motif
Other DBs
NCBI-ProteinID:
QPJ63899
UniProt:
A0A7T0BZN9
LinkDB
All DBs
Position
complement(19448..20797)
Genome browser
AA seq
449 aa
AA seq
DB search
MFESLSSRLDGIYKKLRGRGVLKEADVDEALREIRVALIEADVSLSVIKDFLADVREKAI
GVEVLKSLTPGHQMVKVVSDHLAGLLGEDFSDIRFSSEPPTVILMAGLQGSGKTTSVAKL
ARRFKLKGKTCMMVPADVYRPAAIEQLNVLGQELEVDVYQAGDEKDPVQICKKAIEEAAR
KLCHVVILDTAGRRQNDAELMAELKAIKEATNPHEVLFVADSMMGQQAAETAKTFNEAVG
IDGVILTKLDGDARGGAALSVKSVTGKPIRFVGLGEKLEALEPFHPDRIVSKILGMGDVM
SLVEKAEQIYEVEEREKLEKKIKGNSFTLDDFKDQLKQVQKMGSMQQILSMIPGAGKLKG
VNVDESAFVRIEAIINSMTPAERAKHGMITSSRKRRIAQGSGTRVNDVNKLLKQFAQMQK
MMKKFSSGKMRGIDLGMLGGRGGGFAPFK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaagtttatcatcccgtttggatggaatctataagaagctgcgcggccgcggc
gtgctcaaggaagccgacgtcgatgaagctctgcgcgagattcgcgttgctctgatcgag
gcggacgtcagcctgtccgtcatcaaggattttctggcagacgtgcgcgagaaagccatc
ggcgttgaagtgctgaaaagcctgacgccgggtcaccagatggtgaaggtggtgtcggat
catttggcgggcttgctgggcgaagattttagcgacattcgtttttcatctgaaccgccg
accgtcattctcatggcgggtttgcagggttcgggtaagaccacgtcggtggccaagctg
gcgcgtcgtttcaagctgaagggtaagacctgcatgatggttcccgccgacgtgtatcga
ccggcggcgatcgaacaattgaacgtgttgggacaagagctggaagtcgacgtttatcag
gcgggcgatgaaaaagatcccgtacagatttgtaagaaagcgatagaggaagcggcgaga
aaattgtgtcatgtggtgattctggatacggcgggccgccgacagaacgacgcagaattg
atggcggaactcaaggccatcaaggaagcgaccaacccgcacgaagttttgtttgtcgcg
gactcgatgatgggtcagcaggcggcggaaacggcaaagacctttaacgaagcggttggc
atcgacggcgtcatcctcacgaaattggacggcgacgcgcgcggcggcgcggccttgtcg
gtgaaatcggtgacgggcaaacccattcgctttgtcggtctgggggaaaaactcgaggcg
ctggagccgttccatccggatcgaatcgtttccaagattctgggcatgggcgacgtgatg
tcgctcgtggaaaaagccgaacagatttacgaagttgaagagcgggagaagctggaaaag
aaaatcaagggcaacagtttcacgctcgacgatttcaaggatcagctcaagcaggttcag
aagatgggttccatgcaacagattctttcgatgattcccggcgctggaaaattaaagggc
gtgaacgtcgacgaaagcgcttttgtgcgtattgaggcgatcatcaactccatgactccc
gccgaacgggcgaagcacggaatgatcacatccagtcgcaaacgccggatcgcgcaggga
agcggaacgcgcgtgaacgacgtgaataaattattgaagcagtttgcgcaaatgcaaaag
atgatgaagaagttttcatccggcaaaatgcgcggcattgatttgggtatgttgggcgga
cgcggcggcggttttgctccgttcaagtga
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