Candidatus Nitrohelix vancouverensis: G3M78_00675
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Entry
G3M78_00675 CDS
T09852
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
nva
Candidatus Nitrohelix vancouverensis
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nva03009
]
G3M78_00675
Enzymes [BR:
nva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
G3M78_00675
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
G3M78_00675
Ribosome biogenesis [BR:
nva03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
G3M78_00675
23S rRNA modification factors
G3M78_00675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
HofP
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QPJ66721
UniProt:
A0A7T0G4V6
LinkDB
All DBs
Position
complement(136079..136795)
Genome browser
AA seq
238 aa
AA seq
DB search
MILAGKVRCEGQVADKPGRNVSEDALVEVIEALHPYVGRGGLKLEKALDQFNVSPQNKFA
VDIGASTGGFTDCLLQRGARRVCAVDVGYGQLAWKLQSDPRVQMLDRTNARALTVEQIGE
PADLAVIDVSFISLQLILPAVWRTLDPEGDILALVKPQFEVGKDEVEHQGIIKDTGKHKK
VLEVLQAFVEKNGWVICGLTRSPITGQKGNKEFLIHCVRAGRAEAISSNAILEAVSSE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ctgattcttgccggaaaagtccgttgtgaagggcaggtcgccgacaagcccggacgcaac
gtttccgaagacgccctcgttgaggtgatcgaagcgcttcacccttatgtgggtcgcggc
ggtctcaaactcgaaaaagccctcgatcaattcaacgtatcccctcaaaataaatttgcc
gtagatatcggagcgtcgacaggcggcttcactgattgcctgttgcaacgcggagcgcgg
cgcgtctgcgccgtcgacgtgggctatggtcaactcgcctggaagttgcaatccgatccg
cgcgtccagatgctggatcgcaccaatgcgcgcgcgttgacggtcgaacagatcggagag
cccgccgacttggcggtgatcgacgtttccttcatttctcttcaactgattttgcctgcc
gtctggagaacgcttgatcctgagggcgatatccttgcgctggtcaaaccgcagttcgaa
gtcggcaaagatgaggtggagcatcaaggtattatcaaagatacgggcaaacataaaaaa
gttctggaggtgttgcaggcctttgtcgagaaaaacggttgggtgatttgcgggctgacc
cgttcgccgatcacgggacaaaagggcaacaaagaatttctgatccattgcgtgcgcgcc
gggcgggcggaggccatttcatcgaatgcgatccttgaggcggtttcatcggaatga
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integrated database retrieval system
