Candidatus Nitrohelix vancouverensis: G3M78_00705
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Entry
G3M78_00705 CDS
T09852
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G3M78_00705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nva03000
]
G3M78_00705
Transcription factors [BR:
nva03000
]
Prokaryotic type
Helix-turn-helix
Other families
G3M78_00705
BRITE hierarchy
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
AAA_5
HTH_8
GAF_3
AAA
SpoVT_C
AAA_16
ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPJ64003
LinkDB
All DBs
Position
complement(140644..142143)
Genome browser
AA seq
499 aa
AA seq
DB search
MRHIDSYANIQAIRKISSLFSTTSVEVDELLGMVIDTASEIVGARNTSLLLISDDDQKLQ
FYQATGKNKGKLAGFEIPLKTGISGLVAESGKPIISNDVQNDPRWYRKVSDIVKLKVNSI
ACFPIIVEDTVVGVVQFLDKRDDTPFSDLEVEVLERFTALMAKFFQISKNRMALGAEFDR
LRENYMRRYLIVGESDAVQQCIRLAEKVAPSKAAVLITGESGTGKELFAHLIHDHSPRQN
RPFVSVSCGALPASILERELFGHEKGAFTGADSRKIGLFEAADHGTLFLDEVGEMPLDMQ
VKLLRVLQEESFMRLGGTETIKVDVRVVTATNRDLEKMTQSGEFRQDLFYRINVINMKLP
SMRERKEDISDLVSYFVKKYSPEGTPPKKFDKRLISHLMGYSWPGNIRELENAVERAIVL
SDGDELTNDLFPLEGAQAPVEINVGSTLKDANDAFRRTFIKNTLKTTQGNRTKAANILDI
QRSYLSRLIKELNIREDKL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagacatatagacagttacgcaaatatacaggccattcgaaaaatttcgtctttattc
agcacgacttccgtcgaggtggacgaactgctgggcatggtgatcgacacggcgagcgag
attgtgggcgcccgcaacacgtccttgctcctcatcagcgacgacgaccagaagttgcag
ttttatcaggcgaccggcaagaacaaggggaaactggcgggttttgagattccgttgaag
acgggtatcagcggactggtggcagagtctggcaagccgatcatatccaacgacgtgcag
aacgatccgcgctggtatcgcaaggtcagcgacatcgtcaaactcaaggtcaattccatc
gcctgttttccaatcatcgttgaagacacggtagtgggcgtggtgcagtttttggacaag
cgcgacgacacgccgttttctgatttggaggtcgaggttttagagcgtttcaccgccttg
atggccaagttctttcaaatttctaagaatcgaatggcgttgggcgctgagtttgatcgc
ctgcgcgaaaattacatgcgacgctatctgattgtcggcgagagcgatgcggtacagcaa
tgcattcgtcttgcggagaaagtggcgccttccaaagcggcggttttgattacgggagaa
agcggaaccggcaaagaattgtttgcgcatctcattcacgaccacagtccgcggcagaac
aggccgtttgtttccgtcagttgcggggccttgcccgcgtccatactggagcgcgaatta
ttcggtcatgagaaaggcgccttcaccggcgcggacagccgcaagatcggcttgtttgaa
gcggcggatcacggcaccctgtttctggacgaagtcggcgagatgccgctggacatgcag
gtgaaactgctccgtgtactgcaggaggaatccttcatgcggctcggcggcacggagacg
atcaaggtggatgtgcgcgtcgtcaccgcgaccaatcgcgaccttgagaaaatgacgcag
tctggagagtttcgtcaggatctgttttaccgcatcaacgtgatcaatatgaaacttccc
tccatgcgcgagcgcaaggaagacatttcggatctggtttcctattttgtgaaaaagtac
agccctgaagggacgcccccgaagaaattcgacaagcgcctgatttcgcatttgatgggt
tattcctggccgggcaatatccgcgaattggaaaacgctgttgaaagagctattgtgttg
agcgacggcgacgaattgaccaatgatttgttcccgctggaaggcgcgcaggcgccggtt
gaaatcaatgtgggttccacgctcaaggacgccaacgacgcattccgccgcaccttcatc
aaaaacactttgaagaccacgcagggcaaccgcaccaaggccgccaatatccttgatatt
caacgttcttacctttcccgcctgataaaggaattgaatatccgcgaagataaattataa
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integrated database retrieval system
