Candidatus Nitrohelix vancouverensis: G3M78_01220
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Entry
G3M78_01220 CDS
T09852
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva03420
Nucleotide excision repair
nva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G3M78_01220
03430 Mismatch repair
G3M78_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nva03400
]
G3M78_01220
Enzymes [BR:
nva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3M78_01220
DNA repair and recombination proteins [BR:
nva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3M78_01220
MMR (mismatch excision repair)
Other MMR factors
G3M78_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
AAA_11
DEAD
RBD-FIP
Motif
Other DBs
NCBI-ProteinID:
QPJ64098
UniProt:
A0A7T0G2C6
LinkDB
All DBs
Position
complement(245431..247605)
Genome browser
AA seq
724 aa
AA seq
DB search
MNSSSLNPQQLEAIQCVDGPLMVVAGAGSGKTRVITHRIAHLIRERGTPTDQILAITFTN
KAAGEMKDRVRKMLDVYDAPPWISTFHSFCLRILRRHIDALGFSTEFVIYDSQDQLSMVK
QCMKNAGIDKDSFPPKTLLGHISSFKNDLKMPKDIDLESLSYGNKYKAAELYPRYQEGLK
KNNALDFDDLLIQCVRLFQESPEILERYGRQFKYILVDEFQDTNAVQYRLVKQLSSIHGN
ICVVGDDDQSIYRWRGANLENILDFEKDYPGVKVIKLEENYRSTQNILKAAAGVVEENVH
RKAKTLWTKNAEGEPITYYRAMDEMDEADFVCRRIQAMSDEGSCELNDIAILYRTNAQSR
VVEDVLRKRDIPYQLVGGLKFYERKEVKDILSFVRVILNRDDSVSLKRIVNVPPRGIGKT
SLDKLEAYCQKEGLTLAQGLERAATHRLASPAAAKRMAQFMNVVKYLADYREERSESDFF
RAVIEKTGYAEALRNENSIESRSRMENLEELISAVQQAEEEGRTLQEFLDSCSLTADADT
IQDDRGALAMMTLHACKGLEFRAVFIVGMERGLLPHASSMGENAEYEEERRLCYVGFTRA
REKLFLTNARQRRIYGSTFNYQPSEFLDSVPAEALHIEPSAFQERKETVRSYEESIPAPS
YRPSVKSSGGEDYAVGTRVLHSKFGPGVVIRREGNEDDLKVDVFFKPPHGKKRLAVKVAK
LIVL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaactccagcagtctcaatccccagcaactggaagcgatccagtgcgttgacggccct
ctcatggtggtcgcaggcgccgggtcgggaaaaacccgcgtcatcacgcatcgcatcgcg
catttgatccgtgaacgcggaacgccaaccgaccagattctggcgatcactttcaccaac
aaggcggcgggcgaaatgaaggaccgcgtgcgcaagatgctcgacgtttacgacgcgccg
ccctggatcagcacctttcactctttctgtctgcgcatcctgcgacggcatatcgacgcg
ctgggtttttccaccgagtttgtgatttacgattcgcaggatcagttgtcgatggtcaaa
cagtgcatgaagaacgctgggatcgacaaggattcctttccgcccaaaaccctgctgggg
catatcagttctttcaagaacgatttgaagatgccgaaggacatcgacctggaatctctg
tcttacggcaacaagtacaaggcggcggaactgtatccgcgctatcaggagggcttgaag
aaaaacaacgcgctggatttcgacgatttgttgattcaatgcgtgcgtttgtttcaggag
tcgccggagattctggagcgttacggtcgccagttcaaatacattctggtggatgagttt
caggacaccaacgcggtgcaataccgtctcgtgaaacagctgtccagcattcacggcaat
atctgcgtggtcggcgacgacgatcagagcatctaccgctggcgcggcgcgaatctggaa
aatattctggattttgaaaaagattatcccggcgtcaaggtcatcaagttggaggaaaat
tatcgctcgacgcaaaatatattgaaggccgccgccggagtcgtggaagaaaacgtccac
cgaaaagccaagacgctatggacgaaaaacgcggaaggcgaacccatcacctactatcgc
gcgatggacgaaatggacgaggcggatttcgtatgccgacgcattcaggccatgagtgat
gaaggctcctgcgagttgaacgacattgcgatcctttatcgcaccaacgctcaatcgcgc
gtcgttgaggacgtgctgagaaaacgagacattccctatcaactggtgggcggtctgaaa
ttttacgagcgcaaggaggtgaaggatattctctccttcgttcgcgtgattctcaatcgc
gatgattcggtttccttgaaacgcatcgtcaacgtgccgccgcgcggcatcggaaaaacc
tcgctcgacaagctggaagcctattgccagaaagagggcctcaccctggctcaggggctg
gaacgcgccgcgacgcatcggctggcctcgcccgccgcggcgaagcgaatggcgcagttt
atgaatgtcgtcaagtatctggccgactatcgcgaggagcggagcgaatcggattttttt
cgcgcggtcatcgaaaaaaccggatacgcggaggcattgcgcaatgagaattcgattgaa
agtcgttcgcgaatggagaaccttgaggaattgatctccgccgtgcaacaggcggaagag
gagggccgcaccctgcaggaatttctcgattcctgttcgctgacggcggacgccgatacg
atccaggacgaccgcggcgctttggcgatgatgacgcttcacgcctgcaaggggctggag
tttcgcgccgtgtttatcgttggcatggaacgcggcctgttgccgcacgccagttcgatg
ggcgagaatgcggagtatgaagaagaacgccgcctgtgttatgtgggcttcacccgagcg
cgcgaaaaattattcctcaccaacgcgcgccagcgcaggatttacggtagcacctttaat
tatcagccgtcggagtttctcgacagcgttcccgccgaggccctgcatatcgagccttcc
gcgtttcaggaacggaaagaaacggttcgcagttatgaagaatcgattccggcgccgtcc
tatcgtccttcagtaaaatcgtcggggggcgaagattacgccgtcgggactcgcgtcctg
cattccaaattcgggccgggcgtggtgatacgaagggaaggcaacgaagacgacctgaag
gtcgacgtgtttttcaagccgcctcacggcaagaaacgactggcggtgaaggtcgccaaa
ctgatcgttctgtaa
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integrated database retrieval system
