KEGG   Candidatus Nitrohelix vancouverensis: G3M78_02020
Entry
G3M78_02020       CDS       T09852                                 
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
  KO
K02986  small subunit ribosomal protein S4
Organism
nva  Candidatus Nitrohelix vancouverensis
Pathway
nva03010  Ribosome
Brite
KEGG Orthology (KO) [BR:nva00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    G3M78_02020 (rpsD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:nva03011]
    G3M78_02020 (rpsD)
Ribosome [BR:nva03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    G3M78_02020 (rpsD)
  Bacteria
    G3M78_02020 (rpsD)
  Archaea
    G3M78_02020 (rpsD)
SSDB
Motif
Pfam: Ribosomal_S4 S4 SYY_C-terminal
Other DBs
NCBI-ProteinID: QPJ64241
UniProt: A0A7T0C0E4
LinkDB
Position
complement(423710..424339)
AA seq 209 aa
MARYRGSVCRLCRREGIKLFLKGERCETAKCAIDKRGYAPGQHGQGRRAKFSEYGIQLRE
KQKAKRVYGVLEKPFRNMFAAADRKKGVTGENLLQSLELRFDNVIFRLGFAPSRNAARQL
VRHSHFFVNGKKVNIPSYFLKQGDVITPNPRKGEKAPIKTALEKMKGKTLPHWLAFDPEN
KQGLVQALPAREDVDIPIQEQLIVELYSR
NT seq 630 nt   +upstreamnt  +downstreamnt
ttggcaagatatagaggatctgtatgccggttgtgccgccgagaaggcattaaactgttt
ctaaaaggcgagcgatgtgagaccgccaaatgcgcaattgacaagcgcggctatgcgccg
gggcaacacggccagggtcgacgcgcgaagttttccgaatatggaatacagcttcgcgag
aagcagaaggccaaacgagtgtacggcgtgcttgaaaaaccttttcgcaatatgtttgcc
gccgcagaccgcaaaaaaggggtcaccggcgagaatcttctccagtcgctcgaattgcga
tttgataatgtaatattcaggttgggtttcgcgccttcgcgaaacgccgccagacagctg
gtccggcacagtcatttttttgtgaacgggaaaaaggtcaatatcccttcttatttcctc
aaacaaggcgatgtcataacgcccaatcctcgcaagggggaaaaagcgcctatcaagaca
gctttggagaaaatgaaaggtaaaacgctgcctcattggctggcgttcgacccagaaaac
aagcagggacttgtgcaggccctgcccgcccgagaggacgtcgatattcctattcaggag
caattgatcgtcgaactctattcccgctaa

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