Candidatus Nitrohelix vancouverensis: G3M78_03525
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Entry
G3M78_03525 CDS
T09852
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
nva
Candidatus Nitrohelix vancouverensis
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nva03032
]
G3M78_03525
03036 Chromosome and associated proteins [BR:
nva03036
]
G3M78_03525
03400 DNA repair and recombination proteins [BR:
nva03400
]
G3M78_03525
DNA replication proteins [BR:
nva03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
G3M78_03525
Chromosome and associated proteins [BR:
nva03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
G3M78_03525
DNA repair and recombination proteins [BR:
nva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
G3M78_03525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
YtxC
Motif
Other DBs
NCBI-ProteinID:
QPJ64515
UniProt:
A0A7T0G2N1
LinkDB
All DBs
Position
723994..724296
Genome browser
AA seq
100 aa
AA seq
DB search
MTKAELVEKVASQINLTKKQTEVVVNTVFQSITESLGQGKKVELRGFGSFRIRQRNARVG
RNPKSGDKVDVPAKRVPFFKAGKELRELVDGELDGDDGED
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggccgagttggttgagaaggtggccagccaaatcaatctaaccaaaaagcag
actgaagttgtggtcaataccgtctttcaaagcattaccgaatcgctcggtcaaggcaag
aaagtggagttgcgcggtttcggaagttttcggattcgtcaacgcaacgcccgggtcggt
cgcaatcccaagtctggcgacaaggtggacgttcccgctaaaagagttccctttttcaaa
gctgggaaggaattgcgagaactggtggacggcgaactcgatggcgacgacggtgaagat
taa
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integrated database retrieval system
