Candidatus Nitrohelix vancouverensis: G3M78_03580
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Entry
G3M78_03580 CDS
T09852
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
nva
Candidatus Nitrohelix vancouverensis
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nva03021
]
G3M78_03580
Transcription machinery [BR:
nva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3M78_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_11
UPF0122
HTH_19
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
QPJ64526
UniProt:
A0A7T0C0X5
LinkDB
All DBs
Position
731620..732615
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AA seq
331 aa
AA seq
DB search
MEDANTSDEEEFHESEWQEPELDDGEAEEEVAEVQHALVPLKQNDRSLVPLDPLAAYLRE
IRQYEEMTEEEEHEMAVQYTKDGDMSAAYRLITSNLVLVVRIAMTFRREWQNMMDLIQEG
NVGLMKAVKNFDPMRGVRLPAYATWWIRSYILKFLLDNWRMVKVGTTNTRRKLLYNLKKE
KEKLEQQGFEPSTKLLAERFGVDESEVIDVAAGLGASDLSVDTPYNAGSTLTPLDTLSDG
HSLEDQYVNEHLFDAFNDLISEMKDSLKPIEVQIIEERLLSSDPKSLREIGEENNVTREA
IRQAEQRLKNKIKAFISERLPEAADYFKESD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgcaaatacctcagacgaagaagagttccacgagtccgaatggcaggagcct
gaattagacgacggcgaggcggaggaagaggtcgcagaagtacagcacgctctcgttcct
ctcaagcaaaacgaccgttcgctggttccgctcgaccctctggccgcctatttgcgtgaa
atccgacaatatgaggaaatgacggaagaggaagaacacgagatggcggtgcaatacacc
aaagacggcgacatgtccgccgcctaccggctcatcacttccaatctggtgctggtcgtt
cgcatcgccatgacctttcgccgcgaatggcagaacatgatggacctgattcaggagggc
aacgtcggcctcatgaaagcggtgaaaaatttcgacccgatgcgcggcgtgcgcctgcct
gcctacgccacctggtggattcgctcctatatccttaaattcctgctcgacaactggcgc
atggtcaaggtcggcaccaccaacacccggcgcaaactgctctacaatctcaagaaggaa
aaagaaaagctggagcaacagggatttgaaccctcgaccaaactgctggcggagcgtttc
ggcgtggacgaatcagaagtcatcgacgtcgccgccggactgggcgcctccgacctgtcc
gttgatacgccttacaacgctggctccacgctgaccccgctggacacgctcagcgacggg
cattcgctggaagatcaatacgttaacgaacatttgttcgacgctttcaatgacctcatc
agcgagatgaaagattcgctgaaacccattgaagtgcagatcatcgaagagcgtctgctc
tccagcgaccccaagtccctgcgcgagatcggcgaggaaaataacgtcacacgcgaggcc
attcgtcaggcggaacaacgtctcaagaacaaaatcaaggccttcatcagcgagcgtctg
ccggaagccgccgattatttcaaggaatctgattga
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integrated database retrieval system
