Candidatus Nitrohelix vancouverensis: G3M78_05470
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Entry
G3M78_05470 CDS
T09852
Symbol
cpaF
Name
(GenBank) Flp pilus assembly complex ATPase component
KO
K02652
type IV pilus assembly protein PilB
Organism
nva
Candidatus Nitrohelix vancouverensis
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nva02044
]
G3M78_05470 (cpaF)
02035 Bacterial motility proteins [BR:
nva02035
]
G3M78_05470 (cpaF)
Secretion system [BR:
nva02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
G3M78_05470 (cpaF)
Bacterial motility proteins [BR:
nva02035
]
Pilus system
Pilus assembly proteins
G3M78_05470 (cpaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_29
AAA_16
AAA_22
AAA_30
AAA_7
nSTAND3
ATPase_2
AAA_14
cobW
AAA_11
AAA_19
AAA_23
DEAD
YhfT
AAA_18
NTPase_1
Zeta_toxin
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPJ64864
UniProt:
A0A7T0G308
LinkDB
All DBs
Position
1147276..1148982
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AA seq
568 aa
AA seq
DB search
MALGEKLRLGDVLVKAGVITSEQLGKALAAQKQYGIPLGRVLIKSKLLTEEKLAVSLSEQ
LNIPFIDLQDITIEQDAVSLINENLARLHKLIPISLKGGLLKIAMVDPLNIFAIDEVTIK
SGKDIDINIATETDINRAIQEEYGVAASIQAAVKSLGNLEDKKEEEKSLLGDNAVATKEL
EVDSPVAKLVKVILSQALDDGASDIHIEPGEDSTKIRYRIDGVLFEASSPPKTLESALIS
RIKVLANMDIAETRSPQDGGFGVDLGKPIELRVSTCPTVYGENMVLRILDKSNLRVDLSQ
SGLIGDNLTKVNDLLAKPYGVILVTGPTGSGKTTTLYGALQKLNTPEKNIKTIEDPVEYR
LTGIRQTQVNPKAHITFATGLRSLMRQDPDIIMVGEIRDPETAEIAIQAALTGHLVLSTL
HTNDAPGAISRLADLGAEPFLLSSSIIGVIAQRLIRTICQNCKEPRPATDEELKVLFPNG
DAKPVTLMEGAGCKACKRSGYSGRLGVFEVLVVSDEIRAMILKGASPMEIRGMAKEIQNM
STLRGDGIAKVLMGLTTVKELNRVTFAD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgggagaaaaattacgtttgggagatgtgcttgtaaaagcgggcgttatcact
tccgagcagttgggcaaggcgctggccgcgcagaagcaatacggcattcctttagggcgg
gtgttgatcaagtccaaattgctgaccgaagaaaagctggcggtgagtctgtctgagcag
ttgaacatccctttcattgatttgcaggacatcaccatcgagcaggatgcagtgagtctg
atcaacgagaatctggcgcgtttgcacaagttgattcccatttctctgaagggcgggctg
ttgaagattgcgatggtcgaccctctgaatattttcgcgattgacgaggtgacgattaaa
tcgggcaaggatatcgacatcaatatcgccaccgaaaccgatatcaaccgggccattcaa
gaggaatacggcgtcgccgcatcgattcaggcggcggtgaaaagtttgggcaatctggaa
gataagaaggaagaagaaaaatccctgctcggcgataatgcggtggcgacgaaggaactg
gaggtggattctccggtcgcaaaactggtgaaggtgatcctgtctcaggccttggatgac
ggggcgagcgatattcacattgaaccgggagaagattccaccaaaatcaggtatcgcatt
gacggcgttttgttcgaagccagcagtcctcctaaaacgctggagtcggcgctgatttcg
cgcatcaaggttttggcgaacatggacatcgccgagacccggtcgcctcaggacggcggt
tttggcgttgatctgggcaagcccatcgagcttcgcgtgtccacctgcccgaccgtgtac
ggcgaaaacatggtgcttcgaattctggacaagagcaacctccgggtcgatctttcgcag
tcgggtttgattggcgacaatctgacgaaagtcaacgatctgctggcgaaaccctacggc
gttattcttgtcaccggcccgacgggtagcggtaaaaccacgaccctttacggcgccttg
caaaagctgaacactcccgaaaaaaatatcaaaaccattgaagaccccgtggaataccgc
ctgaccggaatacgacagacccaggtcaatccgaaggcgcatatcacctttgccaccggt
ttgcgttcactcatgcgtcaggaccccgacatcatcatggtcggtgaaatccgtgacccg
gaaacggcggagattgcgatacaggccgcgctcaccggtcatctggttctcagcaccctg
catacgaacgacgcgccgggcgcgatctctcgtctggcggatctgggcgcggagcctttt
ctgctgtcctcttcaattatcggcgtcattgcgcaacgattgattcgcaccatttgccag
aactgcaaggagccgcgccctgcgacggacgaggaattgaaagttttgtttccaaacggc
gacgccaaaccggtcaccttgatggaaggcgcaggttgcaaggcctgcaagcgaagcggg
tacagcgggcgtctgggagttttcgaggtcctggtcgtgtccgatgaaattcgggcgatg
attctcaagggagcgtctccgatggaaatcaggggcatggcgaaggaaatccagaacatg
tcaaccttgcgcggagacggcatcgcaaaagtgttgatgggcttgaccaccgtgaaagag
ctgaaccgagtcacgtttgccgattga
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