Candidatus Nitrohelix vancouverensis: G3M78_05985
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Entry
G3M78_05985 CDS
T09852
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva01501
beta-Lactam resistance
nva02010
ABC transporters
nva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G3M78_05985
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G3M78_05985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G3M78_05985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nva02000
]
G3M78_05985
Transporters [BR:
nva02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
G3M78_05985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QPJ64958
LinkDB
All DBs
Position
complement(1258573..1260183)
Genome browser
AA seq
536 aa
AA seq
DB search
MKRQALSRTAILILFCLFVASCTPENVKEEPAFRLALRAEPPTLDWTLATDSISFNVLTN
IMEGLTQYNAQLEPQPAIAKRWELSKDNKTILFYLRDDVFWSDGKAVTAEDFEYAWKRLL
NPATAAQYAYFLFDLENAEEYNAGRIKDASKVGVRALGPQLLEVKLKKPAVYFPSITTFM
VTFPQRRDIVERYGDRWTDPKHIVTNGPFLLSEWHHEYKLVLRANPGYYDSPPRIDRVDL
YVVEEPTTALTLYETGELDMIELAPVAIEHYKNSPEYQNMPQLRGYYYGFNALKKPFDDA
RVRRALAHSIDRSKIPLILKGGEAPSASWIPKGMFGHNPEIGAHFNPELARRLLAEAGFP
DGQGFPKVAAMYNTGDIHRLIGEFLQAQWKQHLNIEIEFDSQEWKVFLNRLQTDPPAMFR
LGWGADFPDPDNFMNLFISTSGNNRMQWSHPPYDALVAQGSAVTDPKQRLEIYDEAQRIL
TESEAAMIPLFTSAMNLLVRPYVKGFEMNAMELLYIKRIYLEGNRSVTSNSNAQSR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcaagccctgtcccgcactgcgatcctgatccttttctgcctgtttgtcgcc
tcctgcactcctgaaaatgtgaaggaggaaccggcctttcgactggcgctccgcgccgaa
ccgccgactctcgactggacgctggccaccgacagcatttcgttcaatgttctgaccaat
atcatggagggactgacgcagtacaacgcgcaactggaaccgcaaccggcgatcgcgaaa
cgctgggaactttccaaagacaacaagacgattcttttttatctgcgcgacgacgttttc
tggagcgacggcaaggcggtgacggcggaagatttcgaatacgcctggaaacgcctgctc
aacccggcgactgcggctcaatacgcttacttcctgttcgatctggaaaacgccgaggaa
tacaacgcgggcagaatcaaagacgcttcaaaagtcggggtgcgcgcgctcggccctcaa
ttgctggaagtgaaactcaaaaaacccgccgtctatttccccagcatcaccactttcatg
gtcacctttccccagcgccgggatatcgtcgagcgctacggcgaccgctggaccgacccg
aagcatatcgtcaccaacggtccttttttactctccgagtggcatcatgaatacaaactc
gtcctgcgcgccaacccgggatattacgattcgccgccccggatcgaccgcgtcgacctc
tacgttgtggaagaacccaccaccgcgctgacgctctacgaaacgggggaactggacatg
atcgaactggctccggtggcgatcgagcattacaagaacagcccggagtaccagaacatg
ccgcaactgagaggctattattacggcttcaacgcgctaaaaaaacccttcgacgacgcg
cgcgttcgcagagcgctggcgcattccattgaccgttcaaaaattccgctcattctcaag
ggaggcgaagcgccttcggcgtcctggattcccaaaggaatgttcggtcacaacccggaa
atcggcgctcactttaatcctgaactggcgcgacgcctgctggctgaggcgggattcccc
gatggacagggcttcccgaaggtcgccgccatgtacaacaccggagacattcatcgcctg
atcggagagtttctgcaggcgcagtggaaacaacatttgaatatagagatcgaattcgac
agtcaggaatggaaggtttttttgaatcgcttgcagaccgatccgcccgccatgttccgc
cttggttggggcgccgatttccccgaccccgacaatttcatgaacctgttcatttccacc
agcggcaacaaccgcatgcaatggagccatccgccttacgacgcgctggtggcgcaaggt
tccgccgtcaccgacccaaaacaacgactggaaatttacgacgaagcgcaacgcattctg
acggagtccgaagcggccatgattccgctgttcacttcggcaatgaatctgctggtcagg
ccttacgtcaaggggtttgaaatgaacgcgatggaactgctgtacatcaagagaatctat
ctggagggaaatcgaagcgttacttcaaattcgaatgcacaaagtcggtga
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