Candidatus Nitrohelix vancouverensis: G3M78_08125
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Entry
G3M78_08125 CDS
T09852
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva00523
Polyketide sugar unit biosynthesis
nva01110
Biosynthesis of secondary metabolites
nva01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G3M78_08125
Enzymes [BR:
nva01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
G3M78_08125
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Gene cluster
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NmrA
NAD_binding_10
adh_short
KR
Ldh_1_N
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QPJ65358
UniProt:
A0A7T0G3I0
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Position
1762454..1763572
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AA seq
372 aa
AA seq
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MAKKVLVTGGAGFIGSHTVDALIEQEGRSVRVYDNLTPQVHGENAERPQHLHADAEFVLG
DMRDRDGVQRALQDVDVVIHDAAEVGVGQSMYSIDQYISSNVGGTGVLWDVLVNETTQVE
KVIVASSMSLYGEGRYRCEEHGVVVPAPRSEAQMKAGHWELQCPTCEAPALPVPTDEDKA
LDSSSVYAQSKRDQEVYSLLIGRAHKIPTVACRYFNCYGPRQSLNNPYTGAAAIFCSAIQ
NGKAPLIYEDGHQVRDMIHVRDLVQGKITLMKHAEDGIFNIGTGVPTSILKLAETLIDLF
GQDFAPNVIGKFRNGDIRHCYGDISRISALGFQPKISLREGLEELADWVRGQESVSQIEQ
AHQALLEKGLVV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaagttttggttacaggcggggcgggttttatagggtcgcatacggtcgac
gctctgatcgagcaggaaggtcgttcggtccgcgtttacgataatctcactccgcaggtg
catggcgagaacgcagagcgtccgcaacatctgcacgccgatgcggagtttgtgctgggc
gacatgcgcgaccgcgacggcgttcaacgcgccttgcaggatgtggatgtggtgattcac
gacgcggcggaagtcggcgtcggtcagtcgatgtattccatcgaccagtacatctccagc
aacgttggcggcaccggcgttttgtgggatgtgttggtcaacgaaacgactcaggtggaa
aaagtcattgtcgccagttccatgagtctgtatggcgaagggcgctatcgttgcgaggaa
catggcgtggtggttcctgcgccgagaagcgaagcgcagatgaaggcgggccattgggaa
ttgcaatgcccaacctgcgaggctccggccctgccggttccgacggatgaagacaaggcg
ctggacagctcttcggtctacgcgcaaagcaaacgcgatcaggaagtgtattcattgttg
atcggtcgcgcgcataaaatcccgacggtggcttgtcgctatttcaactgctacggcccc
aggcagagtttgaacaacccctataccggcgcggccgcgatcttttgctctgcgatacaa
aacggcaaggctcccttgatctatgaagacggtcatcaagtgcgcgatatgatccatgtg
cgcgatctggtgcagggcaagatcaccctcatgaaacacgccgaagacggcatcttcaat
atcggcactggtgtgcccacctccatcctgaaactggcggaaaccttgatcgatttgttc
ggtcaggattttgccccgaacgtgatcggaaaattcagaaacggcgacatccggcattgc
tacggcgacatttcacgcatcagcgcgctgggtttccaaccgaagatcagcttgcgcgaa
ggcttggaagaactggcggactgggttcgcggtcaagagtcggtgtcgcagatcgaacag
gcgcatcaggctctgctggaaaaagggcttgtggtctga
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