Candidatus Nitrohelix vancouverensis: G3M78_09325
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Entry
G3M78_09325 CDS
T09852
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G3M78_09325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
nva02022
]
G3M78_09325
02035 Bacterial motility proteins [BR:
nva02035
]
G3M78_09325
Two-component system [BR:
nva02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
G3M78_09325
Bacterial motility proteins [BR:
nva02035
]
Pilus system
Twitching motility proteins
G3M78_09325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
AAA_3
TIP49
VpsR
AAA_16
AAA_7
FleQ
Motif
Other DBs
NCBI-ProteinID:
QPJ65583
UniProt:
A0A7T0G3Q6
LinkDB
All DBs
Position
2023274..2024674
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AA seq
466 aa
AA seq
DB search
MMSSILIVDDEKSLREFLTIMLEEKGYEVHSAPDGETAIGLIKERSFDLALTDIRMRRSN
GLDVLDAVKKFQPNTPVVMMTAYATAETAVEAMKKGAYDYLSKPFKVEELQLLIKNALEK
KKLADENTYLKSALFDKHQFSSMVGKGQSMRRVFELIQKVSMSSATVLINGESGTGKELA
AKAIHYNGPRKARPFISINCGALPETLLESELFGHEKGSFTSADTLKTGLFEAANHGTFF
LDEIGEAAPSTQVKLLRVLQEMEFTRLGSSKAIKVDVRVIAATNQDLTKAIHNRTFREDL
YYRLNVVPLTIPPLRERREDLPFLIDHFIRTYNKQNKHKNIIKGVEPEAFAMMEAYHWPG
NVRELENAIERAVVLETSDKIQCSSLPDELMNCEKNMGEWLPTVDDAKPMGLEETLDQIE
KKMLQGALDKTGGIIIKAADILNLSFRSMRYRLEKHKLKGKTKTKP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgatgagttcaattttgatcgttgacgacgaaaagagtctgcgagagtttctcaccatc
atgctggaagaaaaaggctatgaagttcatagcgctcctgatggcgagacggctattgga
ttgatcaaagagcgctcgtttgacctggctttgaccgatatccgcatgcggcgttccaac
ggtctggatgtactggacgccgtcaagaagtttcagccaaacaccccggttgttatgatg
acggcctatgcgacggcggaaaccgccgttgaggcgatgaagaaaggggcttacgactat
ctgtcgaaacccttcaaagtcgaagaactccaactgctgattaaaaatgcgctagagaag
aaaaaactcgcggatgaaaacacctatctgaaatcagccttgtttgacaagcatcagttt
tccagcatggtgggcaaagggcagtcgatgcgccgcgtttttgagttgattcaaaaagtg
tcgatgagttcggctaccgtattgatcaatggagaaagcggcactggaaaagagcttgcg
gcgaaagcgattcattacaacggaccgcgaaaagcgcgtccattcatttcaatcaactgc
ggcgccctgccggagaccttgttagagagcgaactttttggtcatgaaaaaggttcgttc
accagcgccgatacgttgaaaacgggtttgtttgaagcggctaatcacggcacctttttt
ttagatgagattggcgaggccgcaccctccacccaggtgaaattactgcgcgtccttcag
gagatggaattcacccgtttgggaagctcgaaagcgatcaaggtggatgtgcgcgtgatt
gccgcaacgaatcaggatctgaccaaggcgatccataatcgaacttttcgtgaagatctt
tattatcgattgaacgtggttcctctcaccattccgccgttgcgggaaaggagggaggat
ttaccgtttttgatcgatcatttcattcggacctataataagcagaacaagcataagaat
attatcaagggagttgagccggaagccttcgccatgatggaagcctaccactggccgggc
aatgtgcgagaactggaaaatgccattgagcgcgcggtggtgctggagacgagcgataaa
attcaatgctccagtttgccggatgaattgatgaattgtgaaaaaaacatgggcgagtgg
ttgccgaccgttgacgacgcaaaaccgatgggccttgaagagacgctcgatcagattgaa
aagaagatgcttcagggggcgcttgacaagaccggcggcatcatcattaaggcggcggat
attttaaatctcagctttcgttccatgcgatatcggcttgaaaaacacaagctcaaaggc
aaaactaaaaccaaaccctga
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