Candidatus Nitrohelix vancouverensis: G3M78_11895
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Entry
G3M78_11895 CDS
T09852
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nva
Candidatus Nitrohelix vancouverensis
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nva03032
]
G3M78_11895
03400 DNA repair and recombination proteins [BR:
nva03400
]
G3M78_11895
Enzymes [BR:
nva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G3M78_11895
DNA replication proteins [BR:
nva03032
]
Prokaryotic type
DNA Topoisomerases
G3M78_11895
DNA repair and recombination proteins [BR:
nva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G3M78_11895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QPJ66057
UniProt:
A0A7T0C3V3
LinkDB
All DBs
Position
2563694..2565976
Genome browser
AA seq
760 aa
AA seq
DB search
MNDVKLSDLQEELENRFLTYALSTIVSRSLPDVRDGLKPIHRRILYAIDQMGVSATAKHV
KSAKIIGEVLGKYHPHGDASTYESMVRMAQDFAMRYPLVEGKGNFGSVDGDPAAAYRYTE
GRLTPITAFMLADLKKETVDFKLNYDNTLKEPVVLPSQVPNLLVNGSSGIAVGMACSFPS
HNLKEINNALIALIEDPEKTVAQLMKHVKGPDFPTGGVLLSSKQDIQSAYEQGLGSLRVR
GEWTVESLPKGKQQIVITSIPYGINKSKLIEKIAEIIIAKKLPGLTDVRDESDEKIRIIL
ETKSSIDTDKMVAYILKHTDFETSIQINFNCLNPDGEPKRLSLKEIFRYFLDFRKQVVTR
RFEYELRLLEKRLHILIALAKIFNQLDEALKLIRSSSSRKEAHEKIKNAFDLDDDQTTAI
LEIPLYRLVSLEIDKILAEQKEKQAEKKRIEGILKSPAKVWAEVRSEIEIINEKFGDKRK
TKIKTDDSIEFNAEDFVEEEEAFLVVSALGWLRKVKSMPDEATLRFKENDSLLEIVRANS
KDMIAFFTNHGMVYVQKAYQFPYSRGGFGDPIQNIFKFTDGEKPLFISTLDGSGAEIASK
AKPAKKDKQQSLAFEENSNVSEDQCLTVSTQGYGFRFSLSQISETTRAGRKFASLKSGAL
LAGVTPVSGDYVFLASEKGKGMMIPLDETPLLTGPGAGVRLIKLIDTELAGFKCVTAKSS
ATLELDGGKTKEIKMNSVPVYSRGSQGVALSKKLKILSIR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtaaaactttccgatctgcaggaggaactcgaaaatcgtttcctcacctac
gccctgtccaccattgtctcgcgttcactacccgatgtgcgcgatggtttgaaacccatt
caccggcgaattttatacgcaatcgaccaaatgggcgtcagcgcgaccgcaaaacatgtc
aaatcggcaaagatcatcggtgaagttctgggtaagtaccacccgcatggagatgcttcg
acttacgaatccatggtccgcatggctcaggattttgccatgcgctacccgctggtcgag
ggaaaaggaaatttcggctcggtcgacggagacccggcggcggcttaccgttacacggag
gggcgactgactccgatcaccgccttcatgctcgcggacctgaaaaaagaaaccgtcgat
ttcaaactcaattacgacaacactctcaaagaacctgtggtcctgccctcgcaggtgccc
aatcttctggtcaacggctcgtctggaattgccgtgggaatggcttgcagttttcccagc
cacaacttgaaggaaatcaacaacgccctgatcgctctgattgaagacccggagaagacg
gttgcgcaattgatgaagcatgtcaagggacccgacttcccaaccggcggcgtactgctc
agcagtaaacaggatattcaatccgcctacgaacaaggactcgggtcgctccgcgttcgc
ggggaatggacagtcgagtcgcttcccaaaggcaaacaacaaatcgtcatcacctcgatt
ccttacggcatcaacaaatccaagctcatcgaaaaaatcgcagagatcatcatcgcaaaa
aaactaccgggattgaccgatgtgcgcgatgaaagcgatgagaaaatccgtatcattctg
gagaccaaaagctccatcgatacggacaagatggtcgcctatattctcaagcacactgat
tttgagaccagcatccagatcaacttcaattgtctgaatccagacggcgagccgaaacgt
ctgtctctcaaggaaatttttcgttattttctcgacttcagaaaacaagtcgtcacgcgc
cgattcgagtatgaactgcgtctgcttgaaaaacgactgcatatcctcatcgcccttgca
aaaatattcaatcaactcgatgaagcgctcaagctgatacgcagttccagttcgcgcaaa
gaagcccatgaaaaaatcaaaaatgcctttgatctggacgacgatcaaaccactgcgatt
cttgaaattccgctctaccgcctggtctcgctcgaaatagataaaatcctggccgagcaa
aaagaaaaacaggcggaaaagaagcgcatcgaaggcatcctcaaatcccctgcaaaagta
tgggcggaggtgcgttcagagattgaaatcatcaacgaaaaattcggagacaaacgaaaa
acaaaaatcaaaacggacgacagcattgaattcaacgcagaggattttgttgaagaggaa
gaagccttccttgtggtcagcgctttgggatggttgcgtaaagtgaaatccatgccggat
gaagcgaccctgcgcttcaaggaaaacgattccctgctggaaatcgttcgcgccaattcc
aaagacatgattgcatttttcaccaatcatggcatggtttacgtgcagaaggcctaccag
ttcccctattccagaggcggttttggagatcccatccaaaatatttttaaatttaccgac
ggagaaaagcccttattcatctcaactctcgatggttccggcgcggaaatcgccagcaaa
gccaaaccggcgaagaaagataaacaacagtccctggccttcgaagagaactccaatgtc
agcgaagatcaatgtttgaccgtatcgacccagggctatggtttcagattttctctatcg
caaatctccgagaccactcgcgccgggcgcaagtttgccagcctcaaatccggcgccttg
ttagccggcgtcacgccggtcagtggggactatgtctttctcgcttcagaaaaaggcaag
ggcatgatgatcccgctcgacgaaacgccattactcacaggccccggagccggagtgcgt
ctgatcaaattgatcgacaccgagttagcgggcttcaaatgcgtgaccgcaaaaagttcg
gcgacgctggaactggatggcggcaaaacgaaagagatcaaaatgaactcggttcccgtc
tacagtcgcggcagtcaaggcgttgccctgtccaaaaaattaaaaatcctgtcaatccgt
tag
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