KEGG   Candidatus Nitrohelix vancouverensis: G3M78_12915
Entry
G3M78_12915       CDS       T09852                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
nva  Candidatus Nitrohelix vancouverensis
Pathway
nva03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nva00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    G3M78_12915 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nva02044]
    G3M78_12915 (gspD)
Secretion system [BR:nva02044]
 Type II secretion system
  General secretion pathway protein
   G3M78_12915 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: QPJ66245
UniProt: A0A7T0G495
LinkDB
Position
2796011..2798584
AA seq 857 aa
MRHFLTFILIALLTLSLGCAQKRKSTIDKLKEQTALEELYAKRKDSTKPGDPSGKPGAPQ
GDVIADKELKALEQIQPPAKSVTVVTVDAPLRKGPGERFKQIGVAKIDANYKLIRSQRLP
EEEQNWYLVENARGRKFFISGQDAVPPETTPKETTVEPTVAPPAKQSGEAVAQAPETIQT
SKDEIEDEPDQQLSNLDILQMRDTGALDDLRTHLDPSPPVPPELLQAKHITLNFEGTEVY
DVITTFCELLQLDYIIEGAIEGKVTLQTFNKIDVKDLYPVLEQILALHNITVVKSGNFYR
FLPIEEAQRKATGVYLDDDPALPSDERMVIQIVSLQNISKEAAEKVLKPLLTEKAQFIEV
PGSQNMMLVEIASNLKRLVKIVKALDVDKLASSDIQLYRLNNANDEDVAEELKKIFTAMG
FADALDKSLTFLPIERMNSILVVNTIESLTPTIDFWMQKLDQPIAEGNVSTFVYYVQNGE
AAAISTLLNGIFGQSSGQSSLGNIKLTSDKDTKKTTTSTKETGSKTDKGDKSSGTNVSVT
AGGISGEKLEGDITIIPDPDTNSIIIRTNPRNYPAILALIKKLDLFPQQVLIEVLIVDVT
IDENTATGLQLAIQDNMGSPTVSGGVNGNTLGATLGAATASLLTTGGSLVVNQAGKLSAT
LQLFASDSKADILANPILVTSDNKAASISITDEVPIESSSILDTTGGSSLVGTTIEFKDV
GIKLDIVPKINSDNFVNLKINQEISSQGNDITLKSGDTTPSFSKRLVNTEVVLRDKQVLI
MGGLMRTTINENSSGVPYLKDIPYLGRLFGSKEDSKKKTELMLFITPHIISNSEDSEFIT
KQFERRLGDFSQYVNRG
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgagacattttttaacattcattctgatcgccctgctgacgctgtcgctcggttgcgcg
caaaagcgcaagtccaccatcgacaagctgaaagagcaaaccgcgctggaagagttgtac
gcaaagcgcaaggattcaacgaaacccggcgatccatcgggcaagccaggcgcgccgcaa
ggcgacgtcatcgccgataaagaattgaaggcgctcgagcagattcagccgcccgccaag
tccgtcaccgtcgtcacggtcgacgcgcccttgcgcaaaggccccggagagcgtttcaaa
caaatcggcgtcgccaagattgacgcgaactacaaactgattcgctctcagcgtttaccg
gaagaggaacaaaactggtatctcgtagaaaacgccagaggacgaaaattcttcatctcc
ggtcaggacgccgttccgcctgaaacaacgcctaaggaaacgactgtggaaccaacggtc
gcgccgccagccaaacaatccggcgaggcagttgcgcaagcgcctgaaacaatccaaacc
tctaaggatgaaatcgaagatgagccggatcagcaattgagcaatctcgatatcctgcaa
atgcgcgataccggagcgctggatgatttgcgcacgcacctcgatcccagtccgccggtt
cctccggaattgcttcaggcgaagcatatcaccctgaatttcgaaggcaccgaggtttac
gacgtcatcaccaccttctgcgaattactgcaactcgactacatcatcgaaggcgcgatc
gaaggcaaggtcaccttgcagaccttcaataaaatcgacgtgaaagacctgtacccggtg
ctggaacagattcttgccctgcacaatatcaccgtcgtgaagagcggcaatttttatcgt
ttcctgcccatcgaagaggcgcagagaaaagccaccggcgtttacctcgacgacgatccg
gccttgccttcggacgaacgcatggtcatccagatcgtttccttgcagaacatttcaaag
gaagccgccgagaaagttctcaaacccctgctcactgaaaaagcgcagttcattgaagtg
cccggttcgcagaacatgatgctggttgaaatcgcatccaatctgaaacgactggtcaaa
atcgtcaaggcgctcgacgtggataagctggcttcttcggacattcaactgtaccgactg
aacaatgcaaacgacgaggacgtcgccgaagagcttaaaaaaatattcaccgcgatgggc
tttgccgacgcgctcgacaaatccctgacctttcttcccatcgagcggatgaactcgatt
ctcgtggtcaacaccatcgagagtctgacgccgaccatcgacttctggatgcagaaactc
gaccagcccatcgccgaaggcaatgtcagcacctttgtctactatgtgcaaaatggcgag
gcggcggcgatctccaccctgctgaacggaattttcggccagtcgtccggtcaatcgtcg
ctgggcaatatcaagctgacctcggacaaggacacgaaaaaaacaacaacgagtacaaaa
gaaaccgggagcaaaacggataagggcgacaaatcttcaggaaccaacgtcagcgtcacc
gcaggcggcatcagcggtgaaaagctcgaaggcgatatcaccatcattcccgatcccgac
accaactcgatcatcattcgcaccaatccgagaaactatccggcgatactggcgctcatc
aagaaactcgacctgttcccgcaacaggtgctcattgaagtgctcatcgtcgatgtgacc
attgacgaaaacaccgccaccggcctgcaactggcgattcaggataatatgggcagtccg
accgtttccggcggcgtcaatggcaatactctgggagccacgctcggcgcggccaccgcc
agcctgctcacaacgggcggctcgctggtcgtcaatcaggcgggcaaactgtcggcgacc
ctgcaattattcgcttcagactccaaggcagacatcctcgccaatccgattctggtgacc
tcggacaacaaggcggcgagcatttccatcaccgacgaagtcccgattgaaagcagttcg
attctggacacaacgggaggctcgtcactggtaggaacaaccatcgaattcaaggacgtc
ggcatcaaactcgacatcgttcctaaaatcaattccgacaatttcgtcaacctgaagatc
aatcaggaaatcagcagtcagggcaacgacatcaccctgaagtctggcgataccacgccc
tccttcagcaaacgcctggtcaacaccgaagtggtcctgcgcgacaagcaggtgctgatc
atgggcggtttgatgcgaaccacaatcaacgaaaattcaagcggcgttccctacttgaaa
gacattccctatctgggccgtttgtttggcagcaaggaggactcaaaaaagaaaaccgag
ctgatgctgttcatcaccccgcacatcatttccaacagcgaggactccgagttcatcacc
aaacagttcgagcgtcgcctcggcgatttcagccaatacgtgaaccgaggctag

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