Candidatus Nitrohelix vancouverensis: G3M78_13080
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Entry
G3M78_13080 CDS
T09852
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3M78_13080 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nva03400
]
G3M78_13080 (mutM)
Enzymes [BR:
nva01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G3M78_13080 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G3M78_13080 (mutM)
DNA repair and recombination proteins [BR:
nva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G3M78_13080 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
IBR_1
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QPJ66275
UniProt:
A0A7T0G4A7
LinkDB
All DBs
Position
2835660..2836475
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AA seq
271 aa
AA seq
DB search
MPELPEVETLKNALLPLVRHQVLEDIHFHRSNLRYPIPIADLNERFKGRRIDNVLRKGKY
ILFQAETGAMILHLGMSGRVTQSHSAEAKEKHTHIVFKFQSNLYLHFVDPRRFGCVAWAP
ENKGHPLLDRLGVDPMTPELTAQAMKTLAKGCTASIKSFLMDSHRLAGVGNIYACESLFR
SGIRPTSPAGRVSLKRWERLVAELRFVLQQSIDAGGSTLRDFFNADGEPGYYSTQFCVYG
KEKQACPQCSFPITRITQTGRSTFYCKKCQK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccagaagtcgaaactttgaaaaacgccctgctccccctcgtccgccat
caggttctggaagacattcattttcatcggagcaatctgcgctacccgatccccatcgcc
gacctgaatgaacgtttcaaggggcgccgcattgacaatgtcttgcgcaaggggaagtac
attctgtttcaggccgaaacgggcgcaatgatcctgcacctgggaatgagcggacgggtg
acgcagtcgcactctgccgaggcgaaagaaaagcacacgcatatcgtcttcaaatttcag
tccaacttgtatctgcatttcgtcgacccaaggcgctttggttgtgtcgcctgggcgccg
gaaaataaaggacaccccctgctcgaccggctcggcgtcgatcccatgacgcccgagttg
acagcgcaggccatgaaaactctggcaaagggttgcaccgcatccatcaagtcgtttctg
atggattcgcatcgtcttgcgggcgtcggcaatatttatgcctgcgaatcgctctttcgc
tccggcatccgccccacctccccagccggacgcgtgtcgctcaagcgctgggagcgtctt
gtcgctgaattgcgttttgtcttgcaacaaagcattgatgcgggcgggtcgacgctacgg
gattttttcaacgccgacggagaaccgggatattattcgacccagttctgcgtctatgga
aaagagaaacaggcttgcccgcaatgctcgtttcccatcacgcgcatcacccaaacgggt
cgttccactttctattgtaagaaatgtcagaaataa
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