Candidatus Nitrohelix vancouverensis: G3M78_13580
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Entry
G3M78_13580 CDS
T09852
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
nva
Candidatus Nitrohelix vancouverensis
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nva03000
]
G3M78_13580
03036 Chromosome and associated proteins [BR:
nva03036
]
G3M78_13580
03400 DNA repair and recombination proteins [BR:
nva03400
]
G3M78_13580
Transcription factors [BR:
nva03000
]
Prokaryotic type
Helix-turn-helix
Other families
G3M78_13580
Chromosome and associated proteins [BR:
nva03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
G3M78_13580
DNA repair and recombination proteins [BR:
nva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
G3M78_13580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Phage_NinH
HTH_30
HTH_17
Replitron_HUH
Xre-like-HTH
NUMOD1
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
QPJ66369
LinkDB
All DBs
Position
complement(2935600..2935857)
Genome browser
AA seq
85 aa
AA seq
DB search
MQNVDRKARSFLEKWLHKTVKEYVAHMDGGQNGHLHDTIVGGIEKPLVEIVLKEVKGNKT
QAANILGINRNTLRKKIQDHNIQWD
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgtggatcgaaaagcccgctccttcctggaaaaatggttgcataaaaccgtc
aaggaatatgtggcgcatatggatggcgggcaaaacggtcatttgcatgataccatcgtg
ggcggcatagaaaaacctctagtcgaaattgttttgaaagaggtcaagggcaacaaaacc
caggcggcgaatatactgggcatcaatcgtaacaccctccgaaaaaaaattcaggatcat
aatattcaatgggattga
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