Nitrobacter vulgaris: ACS5HD_18740
Help
Entry
ACS5HD_18740 CDS
T11906
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
nvb Nitrobacter vulgaris
Pathway
nvb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACS5HD_18740 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvb03400
]
ACS5HD_18740 (uvrB)
DNA repair and recombination proteins [BR:
nvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACS5HD_18740 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACS5HD_18740 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
Prolactin_RP
SWI2_SNF2
EAD7
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
YDI47927
LinkDB
All DBs
Position
3780862..3783924
Genome browser
AA seq
1020 aa
AA seq
DB search
MAKPPNPPKQPGKPPSAQKSKAPKSKAHRPEVQPIGPALAELLNPAINRGDAGLGSGTGL
QPPPDNSWDRRSGGEAAAHRARASTRGKDDATAKRDASRSPPVSGASDRDREVSPLKDEV
KQKGFDEAPQAEFATPNYGTSATIPTLDPELARQLGFPTAEDDDEALARPPRNKMEGLGV
KATAEALENLIRDGRPEFRGDDGGMKVWTPHRPPRPEKSEGGVRFEIKSEYQPKGDQPQA
IRELVEGIQRNDRTQVLLGVTGSGKTYTMAKVIEATQRPALILAPNKTLAAQLYGEFKNF
FPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHAATRALLERDDVIIVA
SVSCIYGIGSVETYTAMTFALKRGERIDQRQLIADLVALQYKRTSADFTRGTFRVRGDVI
DIFPAHYEDRAWRVNLFGDEVESIEEFDPLTGHKQDELDFIKVYSNSHYVTPRPTLVQAI
KSIKSELKMRLDELHAQGRLLEAQRLEQRTTFDLEMMEATGSCAGIENYSRYLTGRRPGE
PPPTLFEYVPDNALVFADESHVSVPQIGGMFRGDFRRKATLAEYGFRLPSCMDNRPLRFE
EWDMMRPQSVAVSATPGAWELNESGGVFVEQVIRPTGLIDPPVDIRPARTQVDDLVGEVR
ATAANGYRSLITVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTIERIEIIRDLRLGAFDAL
VGINLLREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADQVTGS
MQRAIAETDRRREKQVEYNTANGITPESVKKSIGDILNSVYERDHVLVEIGDGGKGNSWS
DDAIAIGHNFEAVLSDLETRMREAAADLNFEEAARLRDEVKRLRATELAVVDDPTIKQRG
VAAKAGAYAGAKKYGDAANLPARLDKAAQGRPTGKFGKRSSSTSKIHKPSLDEMGIATWH
EVKPTGTRPKPRKPTLDEMGPGTESRIFQPTNSRESGPEFGPRPRSSGGAPGHRGGWKKK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcccaatcctcctaaacaacccggtaaaccgccgagcgctcagaagtct
aaagccccgaagtcgaaggcacatcgtcccgaggtgcagccgatcggacctgcgctcgcc
gaattgctcaatccggcgattaaccgcggcgatgccggcctcgggtccggcaccggattg
caaccgccaccggacaattcgtgggaccgccgctccggcggcgaggctgcggcgcatcgc
gcgcgagcctccacgcgcggcaaggacgatgcgacggcaaaacgggatgcgtctcgctcc
cctcccgttagcggagcgagtgacagggacagggaagtctctcccctcaaggacgaggta
aagcaaaagggcttcgacgaagcgccgcaagcggaattcgcgacgccgaactacggcacc
tccgccaccatcccgacgctcgacccggaactggcgcggcagttgggcttcccaaccgcc
gaggatgacgatgaagcgttggcgcggccaccgcgcaacaagatggaaggccttggcgtc
aaggcgaccgctgaagcgctcgagaatctgatccgcgatggccgccccgaatttcgcggc
gacgacggcgggatgaaagtatggacaccgcaccggccgccgcgaccggagaagagcgaa
ggcggcgtgcggttcgagatcaagtcggagtatcagcccaaaggcgaccagccacaggca
atccgcgaactggtggaaggcatccagcgcaacgaccgcacccaggtgctgctcggcgtc
accggctccggaaagacctacaccatggccaaggtgatcgaagccacgcagcgcccagcc
ctgatcctcgcgccaaacaagacgctggcagcgcagctctacggtgagttcaagaatttc
ttccccgacaacgcggtggaatacttcgtcagttattacgactactatcagcctgaagcc
tacgtaccgcgcaccgacacctatatcgagaaggattcctcgatcaacgagcagatcgac
cgcatgcgccacgcggcaacgcgcgcgctgctggagcgcgacgacgtcatcatcgtcgcc
tctgtgtcgtgtatctatggtatcggctcggtcgagacgtacaccgcaatgaccttcgcc
ctgaagcgcggcgagcgcatcgaccagcgtcagctcatcgccgatctcgtggcgctgcaa
tacaagcgcacatcggccgacttcacccgcggcactttccgcgtgcgcggcgacgtcatc
gatatcttcccggcgcactacgaagaccgcgcctggcgcgtgaacctgttcggcgacgag
gtggagagcatcgaggagttcgatcccctcaccggccacaagcaggatgaactggatttc
atcaaggtctattccaattcgcattatgtgacgccgcgtccgacgctggtgcaggcgatc
aagtcgatcaaatcggaactcaagatgcggctcgacgaactgcacgcgcagggtcgcctg
ctggaagcgcagcggctggagcaacgcaccaccttcgacctcgaaatgatggaggcgacc
ggaagctgcgccggcatcgagaactattcacgctatctcaccggccgccgcccgggcgag
ccgccgccgaccttgttcgaatacgtccccgacaacgcgctggtgtttgccgacgagagc
cacgtcagcgtgccgcagatcggcggcatgtttcgcggcgacttccgccgcaaggccacg
ctcgccgaatacggcttccgcctgccctcctgcatggacaaccggccgctgcgtttcgag
gaatgggacatgatgcgcccgcaatcggtcgcggtatccgccacgccaggcgcatgggag
ctgaacgagagcggcggcgtgttcgtcgagcaggtgatccgtccgaccgggctgattgat
ccgccggtcgacatccgccccgcgcggacgcaggtggacgatctcgtaggcgaggtgcgc
gcaacggctgcgaatggctatcgctcactcatcacggtgctaaccaaacgcatggcggag
gacctcaccgaatatctgcacgagcagggcatccgcgtgcgctacatgcactcggatatc
gacaccatcgagcgtatcgagatcatccgcgatctcaggcttggcgctttcgacgcgctg
gtcggcatcaacctgctgcgcgagggcctcgacattcccgaatgcgcgctggttgccatc
ctcgacgcggacaaggaaggttttttgcgcagcgagacctcgctgatccagaccatcggc
cgcgcggcccgcaacgtcgacggccgggtgatcctctatgccgatcaggtcaccggatcg
atgcaacgcgccatcgccgagaccgaccgccgccgcgaaaagcaggtggaatacaacacc
gccaacggcatcacgccggaaagcgtcaagaagtccatcggcgatattctcaacagcgtt
tatgagcgcgatcatgtgctggtggagatcggcgatggcggcaaggggaattcctggtcg
gatgacgcgatcgcgatcggccacaatttcgaggccgttctctccgatctggaaacgcgg
atgcgcgaggccgccgccgacctgaacttcgaggaagccgcaaggctgcgcgatgaggtc
aagcggctgcgcgccaccgagctggccgtggtcgatgatcccaccatcaagcagcgcggg
gtcgcggcaaaggcgggcgcctatgccggcgcgaagaaatacggcgatgcggcgaatctg
ccagcgcgtttggataaagcagcgcaaggcaggccgaccggaaagtttggcaagcgcagc
tcctcaacctcaaaaatccataaaccctcgctcgacgaaatgggtatcgccacctggcac
gaggtcaagccgaccggcacgcgtccaaagccgcgcaaaccgacgctcgacgaaatgggt
ccggggaccgaaagcaggattttccaaccgaccaattcgcgcgaatccggacctgaattc
ggtccacggccgcgctcatccggcggcgcgccgggccacaggggtggatggaagaagaag
tga
DBGET
integrated database retrieval system
