Nematostella vectensis (starlet sea anemone): 116602256
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Entry
116602256 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
116602256
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116602256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
APP_E2
Motif
Other DBs
NCBI-GeneID:
116602256
NCBI-ProteinID:
XP_032219476
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MAEPAFIIWDPNIVRVKPMIGNNEIKEMKTFVSKPSRRVISTDDTQQALRRLCIAAQEDH
EDEIRYFKNLSNLVNCKDSVGFTILQHVARLDKPEILEILLDAGADIDTKGPEGYTALHL
ATRFNCYECVKILLQHNADQTVGTDEGTLAMHAASRHGYQAVTKLLLDSSRTCVNSTMLG
DLTPLAVACMNGHYETCKLLIDSGANIVCVNVEKRTPLHLAAIQGDHHVVKLLIDSAISK
GIKLGDFIDVLDYEFNTPLHLACTYGREEAVHELLKNGADVNAQRMGSGETPLHIAARRN
KVMIMEELLAKGATIDCRDSASRTPLHRAAFGNQIPAVQLLISKGATKDARDSENNTPFL
LAVKYNKTQAAAELLKRGADIKAKNLFFLSSLHLAVSLHKDCETLKLLLEWDDGSLLSAT
DLDLQTPLHFAAARGSPESINLLLGKNCKIDAKDANDQSPLHIAASNGSVEAARILAHHS
PEAVFSRDSYGHTPIHKAASHGYWKTCEALLKNMSSTRLRDLNFRTPLHSAVTSGSIQTV
KTFLGRTMDSNVLLEMQDSNGNTALHLACANDEVNIVKLLLDEGADVTMRNKDDKTCLDV
AIDWERTEVAKALIQHDRWWEVMCTRNSAGELPMVGLIEALPDVAKLALDQCIERCPLPT
SHQDYCLTFHTVLLDPGPCKEGQTSRDASEVMVENDCEELLSHPVTQVLLRYKWFAFGKV
PYYINLMVFLIFVILFSYFIITERDSSTLYYPTQPNASALEKQYLEKRPSSSNPIAIVLI
LFATIEFLKEFHQIFMIRLDYFKDITNLVELVLYTCAIIFISPYLAEEPLYTAVYGHWNA
GVVTLFLAYLNVLLYIKRIGSSGLYVTMYFEVWCTFLKVIMVFLVVLLGSTLVYYVLLKE
EDNFSGVHFAFVKTFVMMVGEIDYNDVLSSNVINREVNPTTGAPYVPLPPVTYVFFFVFV
VMVPILLMNLLVGLAVGDIDAIQKTASIARLKDQVNYVTDIQRRYPLKMIRMLYKEKIEV
RPNRNRFWKSLIYSGASIVDGEYLDEIIDIAELSDNKKGNLEHGEENEGQKGKIRNLEQK
LDHQTQLLQSVIAKLENLNSSSG
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccagcttttattatatgggacccaaacattgtaagagttaaaccaatgatt
ggaaataatgagataaaagaaatgaagacgttcgtgtccaagccctcccggcgcgtcata
agcaccgatgatacccagcaagcattgcgaaggttgtgcattgccgcacaggaagaccac
gaagatgaaattcgctattttaagaacctgtcgaacctcgttaactgcaaagacagtgta
ggcttcaccatactccagcacgtggcgaggcttgataaaccggagatccttgagattctg
ctggatgctggggctgatatcgacaccaagggaccggagggatatacggcattgcacctt
gcaactagattcaactgctatgaatgtgtcaaaatcctcttacaacataacgctgaccag
actgtgggcacggacgaaggcacgttggccatgcacgccgcctccagacacggttaccaa
gccgtaacgaaacttctactagactccagccgcacatgcgtaaactccacgatgttaggt
gacttgactccgctagctgtggcttgcatgaatgggcattacgagacgtgtaagcttttg
attgactccggtgctaacatcgtgtgtgtgaacgtagagaaaaggacgccgttacacttg
gctgcgatacagggggatcatcacgtggttaagctacttattgattcagcaatatcaaag
ggcatcaaactcggcgatttcatcgatgttcttgattacgagttcaacactccactacac
ctggcctgcacttacggccgcgaggaggctgtgcatgaacttttgaaaaacggtgctgat
gtcaatgcgcagcgcatgggctccggggagacaccgctgcatatagccgcaaggcgcaac
aaagtgatgataatggaggaattgctagctaagggagctacgatcgactgccgtgattct
gcgtcaaggactcccttgcatagagctgcgtttggtaaccaaatcccagccgtccagttg
ctcatctcaaagggcgccactaaagatgcccgcgactccgaaaacaatactccatttcta
ttggctgttaagtataacaagactcaagcagccgctgagctgttgaaacgcggcgccgat
ataaaagcgaaaaacctgtttttcctgtcaagtctgcatttggcggtttctcttcacaaa
gactgcgagacgctgaaattgttattggaatgggatgatggaagcttgttgagtgcaacg
gatcttgatctacagactcctctgcattttgctgccgctagaggaagccccgagagcatt
aatcttcttctcggcaagaattgtaagatcgatgcaaaagacgccaatgaccaatctccc
cttcatatcgcggcgagtaacggttcagtggaggctgcccgcattctggctcatcactct
cccgaagcggtcttctccagggattcgtacggacatactccaatacacaaggccgcttct
catggctactggaagacatgtgaagccctgcttaaaaatatgtcgtcaactcgtctccga
gacttgaacttccggacaccgctccattcagcagtgacgtctgggtccatccaaacggtc
aagacattccttggacgcaccatggactctaacgtcctcctggagatgcaggacagtaac
ggcaacacggcgctgcatcttgcgtgtgcaaacgacgaggtaaacattgtcaagctgtta
ttagacgaaggagctgacgtcactatgcgaaataaagacgacaagacctgcttggatgtc
gcgatagactgggaacgaactgaagtcgctaaagctctaatccaacatgacagatggtgg
gaagtcatgtgcactcggaactctgcgggcgagctgccaatggtaggcctaatagaagct
ctcccagacgttgccaaacttgcacttgatcagtgcattgagcgctgtccactcccgaca
tcccatcaagactactgcttgacttttcacacggtcctactagacccaggtccctgcaag
gagggccagacatcacgtgacgcctctgaagtcatggtcgagaacgactgtgaagaactg
ctgagtcatcctgtcactcaagtgttgcttagatacaagtggtttgcctttgggaaggtg
ccgtattatataaacctgatggtgtttctcatcttcgtgattctcttctcttactttatc
ataaccgagcgggactcctctacgctgtattaccccacgcaacctaatgccagcgccttg
gagaagcagtaccttgagaagcgaccttcatcatcgaaccccatagcgatagtactaatt
ctgttcgccaccattgaatttctgaaggaattccaccagatctttatgataagactggac
tacttcaaagacatcacgaatctagtcgaactcgttttgtatacttgcgcgattatattc
atcagcccgtatctggccgaggagccgctgtatacagcggtttatgggcattggaacgct
ggagttgtgactcttttcttggcgtatttgaacgtgttattgtacataaagcgtattgga
tcctccggtttgtacgtgaccatgtatttcgaggtgtggtgtacctttcttaaggtcatt
atggtgttcttggtggtgttgctcgggagtacgctagtctattatgtgctacttaaagaa
gaggataacttcagtggagtgcatttcgctttcgtcaagacgtttgtgatgatggtggga
gaaatcgactataacgacgtgctctccagtaacgtcattaacagggaggtgaaccccacc
acaggggccccgtatgtaccattgccgcctgtgacttacgtcttcttctttgtgttcgtg
gtcatggtcccgatactactgatgaacttactggtcggtttagcagttggtgacattgat
gccattcaaaagactgcttcgatcgcgcgactgaaagaccaggttaactacgtgactgac
atccagagacgatatccgctcaagatgataagaatgttgtacaaagagaagattgaggtt
cgacccaacaggaacagattctggaaaagtttaatctactctggcgcaagtattgtggat
ggtgaatatcttgacgagatcatcgatatcgccgagttaagcgacaataagaaaggcaac
ctggaacatggagaagagaacgagggacagaaggggaaaatacggaacttggaacagaag
ctggaccaccagactcagcttctacagtctgtaatagcaaagcttgagaatcttaactct
tcctctggctag
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