Nematostella vectensis (starlet sea anemone): 116602991
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Entry
116602991 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
116602991
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116602991
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
DUF2520
HTH_upst_double_PIN
COG6_N
Nup49_C
Motif
Other DBs
NCBI-GeneID:
116602991
NCBI-ProteinID:
XP_032219761
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MNDSEKDNKSSIIENPLYSEGLNGEAERDLDTETRLLMESLRKRHVERRQTLVGIHMSYD
RLDAVDAFENDSISSMDEKYDSDEKVVRGSKPQILNKAVLSGDHVTVTKFLDRKVDANLP
GQFGRTPLHNAVLKGDMRMVKLLLSHGRADVGCRDDRNDTPLHFAVRAGNEEIVQVLLKV
SDCDVNAKGASARTPLHLAASLDKPEICTTLLESNASFDTRDDQGKIPLGVAMECGAANS
ARVLLKYIGQMQLDVEKFLYDADLDGSTLLHLAVDSGFTSVVSLCLEYGSRIREPKRVDR
LTAFHLACEQGAANIVKLLLKEDPGVAKILLVDKDGSTPLHNAAKSNNRAIVELLIEQGA
NVNARNGLNVTPLMLAASTGSADSVHLLMEKGADTTVKDIDGRTAVFNAVGHGATMEVLL
QDKSLVPLLTEKDALGFAPPHYAAKCGDITSIRLFLEHNKMAGSVLSDSQATPLHVAARH
SWHDIIHALVDKQGGKIVNLQDNRGRTPLHYAAAVSANRSAAILLRHGASILRDQNFRTP
LHEAAIKGSKKIVEAIIEKHIYCLNYVDEDKNTALHLAAIHGHARLVSVLLSLPEQEVLL
NSSNQNILDASLEMDIKPVVLAIIEHDRWREVMTSCNAGTTATLIRLVEKMPDVMERFLN
QCIQTEGDSHSSDYKIKYDLSLILSKPTKKNKGTLEVLKAMADNRQDKCLTHPLCFVLLS
KKWRMYGSVVFVLNLLMYLAFLIPLTFLHIELEEGDAIFCPERVNNTATGLIYLKNYKAI
CHRRFPRLQYMQYWLILFTCLHILKEALAFYIQGMRYVSSPSNILDLSAYCAAIFSIVPT
CECKWGRQKEAAAIAMFFGWLVLILHLRRLSFYGKYVIMLYRMFVTLLKVLVLFAFFAMA
FGTTFFLLIDQEPMFTTLPTVLMSMFIMTLGELNYADNFLPFGKQYYKELANIFMILFCL
AMPIIMMNMLVGLAVGDIDKIEKNALIDRYVMQVDMLRDIEGAFPYRLLRRIHMKQYTEY
PNGTPPLFSRIFESLLGFGGAEDEEDLGTRDEFVKDFEEIKVKMDEHSNELEEINDTLKT
VLHMLQNNNQEEVRSVSSVTADDLRQTMSSILSIPRQSIMGLSGLSFGGRPPPRA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcagagaaagacaataaatcctcgatcattgagaaccctctttatagcgaa
gggctgaatggagaggccgagcgggacctggacaccgaaaccagactgctgatggagagt
ttgcgaaagcgacacgtggaaagacgacaaacgctcgtggggattcacatgtcctacgat
cgtctggatgctgtggacgcattcgaaaatgatagcataagctctatggatgaaaagtat
gatagcgacgagaaagtggtgcgaggatccaagcctcagatactaaacaaagcagtgctt
tctggtgatcacgtgactgtgaccaaatttctcgaccgaaaagtcgatgccaacttgccc
ggtcagtttggtaggacgccgcttcacaacgcagtgcttaaaggcgatatgcgtatggtc
aagctcttgctaagtcatggtagagctgacgtgggttgccgggacgacagaaatgatacg
ccactccatttcgcggtgcgtgccgggaacgaagagatcgtgcaggtgcttttgaaggtg
tctgactgcgatgttaacgccaaaggtgcaagtgctcgcactccactccatctggctgcc
agtctcgacaaacccgaaatttgtaccacattgttagaatccaatgcgtcgtttgacact
agagacgaccagggcaaaataccgttgggcgtggctatggaatgtggggcggctaactct
gcccgggtcctcctcaagtacatcggtcagatgcagttggacgtcgagaaatttctctac
gacgcggatctggatggaagcactctcctccatcttgctgtggacagcggatttactagt
gttgttagtttgtgccttgagtatggatcacggattagagagccgaagcgcgtggatcgg
ttgacagcgtttcacttagcgtgcgaacagggtgccgcaaacatcgtcaagttacttctc
aaggaagatccgggggtggcaaagatcctgttggtagacaaagacggctccacaccgcta
cataacgcggccaaaagcaacaatcgcgcaatagtggaactactcattgaacagggggcg
aatgtgaacgctcgcaacggcttgaatgtaacaccgctgatgttagctgcgtcaacgggc
tcagctgattcggttcacttgttgatggagaagggagcagacaccaccgtcaaagacatt
gatggccgaacagcggtgtttaacgcagtcgggcacggggcgactatggaagtgttactc
caggacaagtctttggtccctcttcttacggagaaagacgcgcttggctttgccccccct
cactacgcagctaagtgcggagacatcacaagtattcgactgttcctggagcataacaag
atggcaggcagtgtcctgtccgattctcaggccacgcccctccacgtggcagcccgacac
agttggcatgacatcattcacgcgcttgtcgataaacaaggcgggaaaatagtgaacctg
caggacaatcgcgggcgcactccactacactacgcggctgctgtcagcgcaaatcggtca
gcagccattctattacgccacggggcctctatactcagggatcaaaacttcagaactccg
cttcatgaggcagctatcaagggctccaagaagatcgttgaagcgataattgagaaacac
atttattgtttgaattacgtcgatgaagacaagaacacagctcttcacctggccgccatt
cacggtcacgcacgcctcgtttcggtgttgctctcacttccggaacaagaagtgcttttg
aactcgtccaatcagaacattttggatgcttccctggaaatggacatcaagccggttgtg
cttgctatcattgaacacgataggtggcgagaagtgatgacgtcatgtaacgcagggact
acagcaactcttatccgattggtggagaaaatgccggatgtgatggagcgttttcttaac
cagtgcatacagacagaaggggattcgcacagcagtgattacaagattaaatacgacttg
agtctgatcctgagcaaacctacaaagaaaaacaagggaactcttgaagtacttaaggca
atggcggataaccgtcaggacaaatgtttaacccatcctctgtgttttgtcttgcttagt
aagaaatggaggatgtatggctcggtggtgtttgtcctaaacttactgatgtatctggcc
tttctaatccctttgacgtttttgcacattgagctcgaggagggcgacgcgatcttctgc
cccgagcgcgtgaataacacagctacagggctcatttacctcaagaattataaggcgatc
tgccatagaaggttcccgagattgcaatatatgcagtactggcttatcttatttacttgt
cttcatatcttgaaagaggcgctggctttctatatccagggcatgcgctatgtttcctcc
ccgtcgaacattctggatctatctgcatactgcgctgccatcttctctatcgtgccgacc
tgcgaatgcaagtgggggcggcaaaaggaggcggcagcgatagccatgttctttggttgg
cttgttctcattttgcacctgcgaaggttatcattttacggcaaatacgtcatcatgctg
taccgcatgttcgtcacgctacttaaggtcctggtgttatttgccttcttcgctatggca
tttggcaccacattctttctacttattgaccaggaaccgatgttcacgaccttgccgacg
gtgcttatgtcgatgtttatcatgacgcttggagaactcaactacgcggacaacttcctg
ccattcgggaagcaatactacaaggagcttgctaacatatttatgatactgttttgccta
gcaatgccgatcatcatgatgaatatgctggttggtctagctgttggagatatcgacaaa
atcgagaaaaacgctttgatcgacagatacgtgatgcaggttgacatgttgcgggacatc
gagggcgccttcccttaccgcttactccgccgcatccacatgaagcagtacacggagtac
ccgaacggaacaccgccattattctctcgtatatttgaatcactactcggttttggtgga
gcggaagatgaggaagacctgggtactagagatgagtttgtgaaagactttgaggagatc
aaggtcaaaatggacgaacattcaaacgagttggaagaaattaacgatactcttaaaaca
gtcctacacatgctacagaacaataaccaggaagaagtcaggtcggttagctcagttacc
gcagacgatctccggcaaacaatgtcgtctattctcagcatcccaaggcaaagcatcatg
ggactgtccggtctgtcatttggtggcaggccgccaccaagagcatag
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