Nematostella vectensis (starlet sea anemone): 116603932
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Entry
116603932 CDS
T01037
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116603932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nve03036
]
116603932
03400 DNA repair and recombination proteins [BR:
nve03400
]
116603932
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116603932
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
116603932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Ndufs5
VARLMGL
Motif
Other DBs
NCBI-GeneID:
116603932
NCBI-ProteinID:
XP_032221486
LinkDB
All DBs
Position
Unknown
AA seq
1462 aa
AA seq
DB search
MTSKEFTPSRKCGSCLDLDETEKNSDDKDCQNTRHSSSTYGIAIDSSRIRSVPLEEQSTV
LRDLGIGVFDQEEFEEGILKQVDEAIAVKETEALIQGWVKDLKAVNDDIESVHKDLEEID
RLVKGLSSTAAHNYDACRRLEAVKKHRENKHRQLQKLEARQKALNNKLGIGAEDAQDEEE
VETSTEDAKIMAMEERIKIMKKLEEQRDQLIKTGKMTPFGGSINNTANSATADNVHTTTI
DYPTSLTTTISEEMKSTVKTPEDDDDDNGDDYNDDGEMEGQDKDSGDDYIPEEEELRDSW
NDKERPNLKSNTRKRPAKDTKNNQRHANVKYVDEEDEVKPKKVKKKKDNFKHRALDDGDD
GAYHKRIRHVRIQSLLKKQGLNDNESSDEEEFSDMEFDNNYKVPGQIWHKLYKYQQTGVK
WLWELHCQQAGGIIGDEMGLGKTIQTVVFLAGLKYSGISARKSRRDQGLGPVLIVCPVTV
LHQWVKEFHKWWPEFRVAVLHDTGSFSGRRDALVRKICKAHGVIVTSYSGVRCNQDALLA
QRWDYVILDEGHKIRNPDAEITLACKQIRTPHRIILSGSPMQNNLRELWSLFDFVFPGKL
GTLPVFLTEFSVPITTGGYANASKVQVQTAYKCACVLRDTINPYLLRRLKKDVKMDLELP
NKNEQVLFCRLSDEQRQLYEQYLDSREVQSILAGKYKVFPGLIMLRKICNHPDLTSEAGS
LIKAKQDEEEAKRGVVKPRGPDDGYGDWRRAGKMVVVEALLKMWKTQGHRVLVFSQTRQM
LNILELFVSSRGYNYRRMDGSTSVATRQPLVNKFNQDESIFVFLLTTRVGGLGVNLTGAD
RVIIYDPDWNPSTDTQARERSWRIGQRKQVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVL
EDPKQRRFFKTNDLYELFTLDDSYKKQGTETGAIFAGTNCQVKVSGSRKKKSDPRLESRA
VVKSHVSSRSGKRPITCPPRDAKKQSTCTTGSSRSDDFGFTIDERDIQEIQRQKRDPGPA
IPPPNPDANPEDATGNDMNLKSDAGSVLESSKANEEGIGTRSPTVVGVTNVTEKTDSKAR
SVDSNQSIDKQSTKDSNVSRLLPLHTEASLGMEDMPKRGDLIPSASFQARSSSSKDESQL
LASLSSVPSSGSSSRKAKDGACHKPVRPGSHKSKLVSLSDKQLKKKIRIHKKKKRKKIEG
HVIDNLDYHVRYSAGSGTSDTGTEKPDSRHDDVILKALFKRGGVHSALQHDVIMESGNAD
YTLVENEANRVAQQAVQALKKSRQRCLGATSGIPTWTGASGSSGFTDTRRPKLRFGKKRP
AATSSVTAESDESKPTKRAADQPLFSGAMMGVETADHTNEPASSADLLARMRARNNILPN
EETGPSYMQSTEHDALLAEMSDFVAHRGRVPFQASTDELVARFKDQLPKNNSAVFRALLR
RICVFSRGEGKGGIWTLKPEFA
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtaaagagttcacgccgtcccggaaatgtggaagttgtctcgatcttgatgaa
actgaaaaaaatagcgacgataaagattgccaaaacacgagacattcttcgtcaacgtat
ggcatcgcgatcgattcctctcgaataaggtctgtcccccttgaggaacaatccacagtg
cttcgagatcttggcatcggtgtgtttgatcaagaggagtttgaagaaggaattttgaaa
caagtcgacgaggccatcgctgttaaggagacggaggctttgattcaaggatgggttaaa
gacctcaaggccgtcaacgatgacatagaatctgtacacaaagatctggaagaaatagat
aggcttgtaaaaggcctgagttccactgctgcccataactatgacgcctgtagaagacta
gaagcggtcaagaagcatagagaaaacaagcaccgtcagcttcagaagcttgaagccaga
cagaaggccctaaacaacaaactgggcattggagctgaagatgcccaagatgaagaagaa
gtggaaacctctactgaagatgcaaaaataatggcaatggaggagagaattaagatcatg
aaaaaactggaagagcagcgagatcagttaattaaaactggaaaaatgacaccatttggg
ggatcaataaataatactgccaactctgcaacagctgataatgttcataccaccacaatt
gattatccaacaagtctaacaacaacaatttctgaggagatgaaaagcacagtcaagacc
ccagaagatgatgatgatgataatggtgatgattataatgatgatggagagatggagggc
caagataaagacagtggtgatgactacatcccagaggaagaggagttgcgtgacagctgg
aatgacaaggaaagacccaatctgaaaagcaatacaagaaaaaggccagcaaaggatact
aaaaataaccaaagacatgcaaatgtgaaatatgttgatgaagaagacgaggtcaagcct
aagaaagtgaagaaaaaaaaggataatttcaagcacagggcattagatgatggtgatgat
ggtgcttatcacaagagaataaggcatgtcaggattcagtcattactgaaaaaacaagga
ctgaatgacaatgagagctcagacgaggaagaattttcagacatggagtttgacaataac
tacaaagttcctggtcaaatctggcacaagctgtacaagtaccagcagacaggtgtgaaa
tggctctgggaactgcactgccagcaagccggtggcatcatcggcgatgagatgggactc
ggcaagaccattcagactgttgtgttcctggctggtcttaagtacagtgggatttcggcc
agaaagtcaaggcgtgaccaaggtcttggtccagttcttattgtctgcccagtcacagtg
ctacatcagtgggtcaaggaattccacaagtggtggccagaatttagagtcgctgtgcta
catgatactggctcgttttctggacgtcgggacgccttggtcaggaagatctgcaaggct
catggcgtaatcgtcacctcttattctggagttcgctgtaaccaggatgctttgctggca
cagcgctgggattacgtcattctcgatgaagggcacaagataagaaacccggatgctgag
ataactctcgcctgcaaacagattcgcacaccccatcgcatcattctctctgggtcaccc
atgcagaataatcttcgtgagctctggtcactctttgactttgtgttccctgggaagctt
ggcactcttcctgtattcctgaccgagttctctgtaccaataacaactggaggctatgcc
aacgcatccaaagtacaggttcagacggcatacaagtgtgcgtgtgtgttgagggatacc
attaacccatacctgctgagaagacttaaaaaggatgtgaaaatggatctagaactccca
aacaaaaatgaacaggtcttattttgtcgtttgtctgacgagcaacgccagctgtacgag
cagtatctggattcgagagaagtccagtcaattcttgctggaaaatacaaggttttccca
gggcttatcatgctgcgcaagatttgcaaccaccctgacctgacgtccgaggccggctcc
ctcatcaaggccaaacaagacgaggaggaggcgaaaaggggcgtggtcaaaccacgtggg
cctgacgatgggtacggggactggaggcgggcggggaagatggtggtggtcgaggcgctg
ctcaagatgtggaagacacaggggcacagagtgttggtcttctctcagactcgccagatg
ttaaacattttggagttgttcgtatcgtctcgcggttacaactaccggcgtatggacgga
agtacgagcgtcgccacccgacaacctctcgtcaacaagttcaaccaggacgagtcgatc
ttcgtatttctgctgacgactcgtgtgggaggccttggggtgaacctgacgggagctgac
cgcgtcatcatctatgacccagactggaacccaagcacggacacacaggcccgcgagcgc
tcctggaggattggacagaggaagcaagtcaccatttatagacttctaaccactgggacc
atcgaggagaagatttaccacagacaaatcttcaagcagtttctgaccaaccgcgtgctg
gaagaccccaagcagagaagattcttcaagacgaatgacttgtacgagctttttacacta
gacgacagctacaagaaacagggcacagagaccggagctatctttgccggtaccaactgt
caggtcaaggtctctggatctcgcaagaaaaagtcagacccgcgtttggagtctcgcgcc
gtggttaaatctcacgtttcatcgcgttccggaaaaagaccaatcacgtgcccgccacgt
gacgcaaagaaacagtccacgtgcacaaccggctcctcgaggagcgatgatttcggattc
actattgacgagagagatattcaagagatacaacgacagaaaagggatcccggacccgcc
ataccgcctcccaatcccgacgccaaccccgaagatgctaccgggaatgacatgaatctg
aaatcagatgctggaagtgtgttggaaagttcgaaagcaaatgaggagggaattgggaca
agaagcccaacagtggttggtgtgaccaatgtcacggagaagacagattccaaagcgaga
tctgtcgattctaaccaaagtattgataaacaatcaaccaaagactcaaacgtgtctcgg
ttacttcccttgcatacggaagcatctttgggtatggaagacatgcccaaacgtggtgat
ctgattccaagcgcatcctttcaggcgcgttcgtcgagttcaaaagacgagagccagtta
ctggcatctttgtcaagtgtcccgtcaagtggcagctcgagtaggaaggctaaggatggc
gcatgtcataaacccgttaggcctggcagtcataagagcaagctggtctcattatccgat
aagcaactcaagaaaaagatacggattcacaagaagaaaaagcgaaaaaaaatcgagggc
cacgtgatcgataacttggactaccacgtgaggtatagtgcggggtctgggacgagcgac
acagggaccgagaaacctgactccaggcacgatgacgtcatactcaaagcgctattcaag
aggggtggggtccatagtgccttacagcatgacgtcatcatggagtcaggaaatgcggac
tacacattggtcgagaacgaggctaatcgcgttgcccagcaggcggtgcaggccttgaag
aaatcacgtcagcgatgtcttggcgcgaccagcggtattccgacgtggacaggcgcatcg
gggtcttctggatttactgacacgcggagaccaaaactacgattcggtaagaagcgtcca
gcggctacaagcagcgtcacagcggaaagcgacgagtctaagccgacaaagcgcgccgct
gaccagccattatttagtggcgcaatgatgggcgtcgagaccgctgaccacacaaatgag
cctgcctcctccgctgatctgctggccagaatgagggcccgcaataacatcctaccgaac
gaggagactggccctagttacatgcaatccacggaacacgatgctttgcttgccgaaatg
agtgactttgtcgctcaccgaggccgtgtcccgttccaggcctccaccgacgagctagtg
gcgcggttcaaggaccagcttcctaaaaataactcggcggtttttcgcgcgcttttgagg
agaatctgcgtgttttcgcgaggtgaggggaaagggggaatatggacattgaagccagag
tttgcgtaa
DBGET
integrated database retrieval system
