Nematostella vectensis (starlet sea anemone): 116605606
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Entry
116605606 CDS
T01037
Name
(RefSeq) Bloom syndrome protein homolog
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03440
Homologous recombination
nve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116605606
03460 Fanconi anemia pathway
116605606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nve03032
]
116605606
03400 DNA repair and recombination proteins [BR:
nve03400
]
116605606
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116605606
DNA replication proteins [BR:
nve03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116605606
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
116605606
Bloom's syndrome complex (BTR)
116605606
FA (Fanconi anemia) pathway
116605606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
Motif
Other DBs
NCBI-GeneID:
116605606
NCBI-ProteinID:
XP_032224216
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MATLKLVRKTNTKGKENKPDSTKSKTLLGYFAKGNGIAPLNPIVAPKVCNNTGLHRPVAH
IPPFTSSVAAQGKAPIKSVSALSWPGTDQSEIMDSDDDFDFDTTSPLPKKRKFENGQSLK
PTVEMNAASAVSPSQGKCTDTSNTAPSLDALKDDSLVEDEVNWSFGFGISDNLDDQPEEN
HPNHPASPDNDAGKPIEDHTGNDGDDENHDKCHHNDVADDAYDDIPPDSPVWEDDELFVS
PEPCSPLDQGETHEDDLAFIDIQVPSSVKPPGGEDEISPKKISTRVLKNQLEAVQKRLLQ
IEQERARLLSKVSNIRTMLRERGEMVPIQDSRDDGFQVDSTLAAQPFHSTSTPLVSTNRH
NQGRDSLQGKTPSTGIPSFAPATPTMKSPPCGDGFFDASTIPPIGYKSGQSFSSFHSTGT
PAFTDIDNHVTSWNSRNNSFPKTSRSSLTSENLVTPLSRINDPSTGISCSSVPGASLDGF
SLDSDDDDDLVVLTGPSKGSTRPSSVLQSSSLKPLNTSTTRPASSGYTNGLNFSSSGRNG
GMSSSQQTLFGTQSKPAPRHKSSVPNDGDDAELRRTDYPHSKDMWKILRDVFCIRSLRTN
QLQVINAAMMRKNCFVLMPTGGGKSLCYQVTALMNRGVTFVISPLKSLIQDQVQRLNSMR
VPATHLSGDVTSAEANRHVSSVYQDLSLRQPSLKLVYITPEKLSASGKLHSVLKSLHNRG
LLDRFVIDEAHCISQWGHDFRPDYKKLSDVKNKYPGVPVMALTATATPRVRQDIENQLKM
NGDNCKRFTQSFNRSNLQFQVKPKKKAIVEEITELIKSKYPHASGIVYCLSRKECERVAD
CLSTSGIRAVPYHAGLDDEKRVKTQEIWIQGRVQVVCATIAFGMGIDKGDVRYVIHYSMP
KSLEGYYQECGRAGRDGKKAECILYYSYGDMHRIRRMIEGDKATKDVHMDNLYRVVQFSE
NSTECRRVQLLHYFGETDFNRSMCQADPQTVCDNCQNAVSHTNRDIMAEAKAFVRTVNRV
VHDNNSQWQRPKNVKFPLNHFVDIFKGSTNARVTQEGHDTCALYGMGRDFHRNDAERLAR
MLVMKDVLREKMVTGFHDNVLCYAVLGPNGMALVNDRFKLDPFPVRSERPKSTGGKTSKR
KRKTGANEDAQVDTTNQGSFLDDDGQSPYWQAGAASTAGRKSARTSARSKPSSSTSGLSK
FQYKNKRPRGGVRRGGNTSGGSTSGSRPALGLMAPPRPNTRF
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctaaagcttgtcaggaaaacaaacactaaaggaaaagaaaacaagccggac
tcaacaaaaagcaaaaccctattaggatatttcgctaagggaaatggcattgcgcctttg
aatcccattgttgcaccaaaagtttgcaacaatactggcctccatcgcccggttgcacat
atcccgccattcaccagcagtgtggctgctcaaggaaaggcgcccattaaatctgtgtca
gctctttcctggccaggaacagaccaatcagagatcatggattctgatgacgactttgat
tttgatactacatcccctctgccaaaaaagagaaaatttgaaaatggacaaagtctcaaa
cctacagtggagatgaatgctgcctcagctgtctccccatctcaaggcaagtgtacggat
acttcaaacacagccccatcactggatgctttgaaggatgatagtttggtggaagatgag
gtcaattggagttttgggtttggaattagtgataacttggatgaccagcctgaagaaaat
cacccaaatcaccctgccagtcctgacaatgatgctggcaagcctatcgaggatcacact
ggaaatgatggtgatgatgagaatcatgataaatgccatcataacgatgtcgcagatgat
gcctatgatgacatccctccggatagcccagtatgggaggatgatgagctgtttgtgtct
ccagagccatgttctcctttggaccaaggagagacacatgaagacgaccttgcattcata
gatattcaagttcctagttctgttaaaccacctggtggcgaggacgagatctcacccaag
aagatatctacacgggttctgaagaaccagctcgaagcagttcaaaagcgccttctccaa
atcgagcaagaaagggccagactgctgtccaaggtatctaatatcaggacaatgttacga
gagcgtggagaaatggtgccaatacaagatagcagagacgatggcttccaagttgactcc
acactcgctgcgcaaccctttcacagcacaagcacacctttagtgtccactaatcgccat
aaccaaggccgagactccctccaaggaaaaaccccatccacagggatcccctcattcgca
cctgccacgcccaccatgaaatcacctccctgcggcgatgggttcttcgacgctagcaca
atccctccaattggttacaaatcagggcaaagtttttcaagcttccattcgacgggtact
ccggcattcactgacattgataaccatgtcacctcttggaattctaggaataactcgttt
ccaaaaacttctcggtcatcgttgacaagtgaaaatctggtcactcctttgtccaggata
aatgatcctagtacaggaattagttgcagctccgtccctggggcatctttggatggattt
tcattggacagtgatgatgacgatgaccttgtagtcctaacaggaccgagcaagggttct
acaagaccgtcatcagtgctccagtcatcttcactgaaaccactcaatacctcgacaacg
aggcctgcttcgagtggctatacgaacggtctgaacttttcgtcgagcggtcggaatgga
ggaatgtctagctcacagcaaacgttgtttgggactcaaagcaaaccagcgccacgtcac
aagtcgtcggtgccaaacgatggtgatgacgccgagttgcgtcgcaccgattacccacat
tctaaggacatgtggaagatcctccgcgatgtgttctgcatcaggagcctccggacgaac
cagctgcaagtcatcaatgccgccatgatgagaaagaactgctttgtgctgatgcccaca
ggcgggggcaagagtctgtgttatcaggtgacagccctgatgaatcgtggtgtgacgttt
gtgatctcaccgctcaagtctctgatccaggatcaggttcagcggctcaactccatgcgg
gtccccgcgacccacctatcaggtgacgtcactagcgctgaagctaatcgccacgtgagc
tctgtctaccaagacctgtcgctaaggcaaccaagcctcaagctggtctacatcactccg
gagaagctgtcagctagcggcaagctgcactcagtactcaagagtctgcacaacaggggc
ttgctcgacaggtttgtgatcgatgaagcccattgcatcagccagtggggtcacgacttc
cggccggattacaagaagctgtcggatgtgaagaacaagtacccgggagttcccgtgatg
gcgcttacggcaacggccacgccccgggtgcgacaggatatagaaaatcagctcaaaatg
aacggggacaactgtaaacggttcacacagagcttcaatcggtccaacctgcagttccag
gtcaagccaaaaaagaaagcgatcgtggaggagatcactgaactcatcaaatccaaatac
cctcacgcctcaggcatcgtctactgtctttcaagaaaagagtgtgaacgagtggcggac
tgcctcagtacgtctggcatacgagccgtcccttaccacgcgggactggatgacgagaag
cgggtcaagacccaagagatctggatccaagggcgtgtgcaggtggtgtgtgccacgata
gcgttcggcatgggtatagacaagggcgacgttcgttacgtgatccattactccatgcct
aagtcccttgagggctactatcaggagtgcgggcgagcgggcagggatggcaagaaggcc
gagtgcatactgtactattcctacggtgacatgcacaggataagaagaatgatcgagggg
gacaaagcgacgaaggacgtacatatggataacctgtaccgcgttgtccagtttagtgag
aactccactgagtgccgacgagtacagctgcttcattactttggcgagacagatttcaac
agatccatgtgtcaagcggacccgcaaaccgtatgcgataattgccaaaacgcggtgagt
cacacaaaccgagacatcatggccgaggccaaggcttttgtgcgcaccgtcaaccgagtc
gttcacgacaacaacagccagtggcaacgacccaagaacgtcaagttcccgctcaatcac
tttgtggatatcttcaagggctctactaacgcccgagtgacccaggaaggtcacgacacg
tgtgcgctgtacggcatgggaagggacttccaccggaacgacgcggagcgcctagcgcgc
atgctcgttatgaaggacgtactaagagagaagatggtcacgggcttccacgacaatgtg
ttgtgttacgctgtgctggggccgaacggcatggcgcttgtcaacgatcgatttaagctg
gacccatttccggtccgaagtgaaagacctaaaagcacaggtggtaagaccagtaagcgc
aagagaaagacaggtgctaatgaagacgcccaggttgataccactaaccagggcagcttt
cttgacgatgatggccagtctccttactggcaggcaggagctgcttcaaccgcaggaagg
aaaagtgccaggacgtctgccagatcgaaaccatcttcatctacgagtgggttatccaaa
ttccagtacaagaataaaaggcctcgaggcggagtaaggagaggtggcaatacttccggt
ggtagcacttccggttcacggcctgcccttggactgatggctcccccaagaccaaacacg
cggttttaa
DBGET
integrated database retrieval system
