Nematostella vectensis (starlet sea anemone): 116607876
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Entry
116607876 CDS
T01037
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116607876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nve03041
]
116607876
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116607876
Spliceosome [BR:
nve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
116607876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
AAA_19
PWI
nSTAND3
AAA_30
nSTAND_NTPase5
T2SSE
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
116607876
NCBI-ProteinID:
XP_032225192
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MANLSSWVADKLHDVLGFSDKHTSEYLLSLAKSSESSEEMVSKISDSFGADEKLVGFAKE
MWSRVPHKQQTTENPYRAREREILKQREKFASYKLLSDDDEEEEAPKPSQTDRKRKHLRQ
KTETSSDSSEDEGRGAETSRVSPGGESESEDEWERVENERMKDLEERDAFAERLKAKDKE
KQRNIVERSDRKAFEEARKRLQLDEEDRKKMLPELRKKSRREYVKKRKVEKLESLQEDIM
DDEYLFEEDKLSRREKAERDYKRRVLSLAKEHQNASKLEKVQRYQMPKEKAQPSQYDEIL
DDEKGPNYEQKKWEEDKLGHAQMRFGAKDAKDKNKPAEYELLVEEEQINFVMAQQIPGSN
KPAEPQMSESERKMQTIQEVRRSLPVYGYREELLEAISEHQVLIIEGETGSGKTTQIPQY
LYEAGYTKDKKKIGCTQPRRVAAMSVAARVSEEMGTKLGNEVGYSIRFEDCCSERTILKY
MTDGMLLREFLGEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPDIKLIISSATL
DADKFSSFFDDAPIFRIPGRRFPVDIYYTKAPEADYLDATVVTVLQIHITQPDGDVLVFL
TGQEEIETAQELLQDRTRKLGSKIKELIILPIYSTLPSDLQAKIFEPTPPGARKVILATN
IAETSLTIDGIIYVIDPGFCKQKSYNPRTGMESLVVTPISKASANQRAGRAGRVNAGKCF
RLYTAWAYNNELEENTIPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPAETLILALEQ
LYALGALNHHGELTKLGRKMAEFPVDPMMSKSLIAAEKYKCVDQMLTIIAMLSVNNAIFY
RPKDKIVHADNARTNFFRPGGDHLTLLNVYDQWAETDYSTQWCYENFIQHRSMKRARDVR
EQLEGLIERAEIEMSSNPGDFTAIRKAVTAGFFYHTARLGRGGQYRTVKHQQTVMVHPNS
SLFQEQPKWVIYHELVFTTKEYMRQVIEIDNMWLLEVAPHYYKNKEVEDSSSRKMPKKAG
VTGQQVRSV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggctaacttgtcaagttgggtcgcggataaattgcacgatgtcctaggattttcggac
aaacacacttcggaataccttcttagtttggcgaaaagctctgaaagctcagaggaaatg
gtcagtaagatttcagatagtttcggagctgacgagaaactcgttggattcgctaaggaa
atgtggtcgagggttccacacaaacaacaaacaactgagaatccatatcgggctcgtgag
cgagaaatactaaaacaacgagagaaattcgccagttataaactactgtccgacgacgac
gaggaagaagaagctcccaaaccatctcaaactgatagaaagaggaaacatttgcgacaa
aaaacagagactagttcagacagcagtgaagatgaggggaggggtgcagagacgagcagg
gtctccccagggggggagagtgagtcagaggatgagtgggagagggtggaaaatgaacga
atgaaggacttggaagaaagggatgcttttgctgaaaggttaaaggccaaagataaagaa
aagcaaaggaacattgtggagagatcagacagaaaggcatttgaagaggctcgcaaaaga
ctacaattggacgaagaagatagaaaaaaaatgttacctgaactaagaaaaaagtcacgt
agagaatacgtcaagaaaagaaaagttgaaaaacttgagtcactccaagaggatatcatg
gatgatgaatatttatttgaggaggataaactcagccgaagagagaaagcagaacgtgat
tacaagaggcgggtgctatcccttgccaaagagcatcaaaatgctagcaagctagagaaa
gtccaaaggtatcaaatgccaaaagagaaagcacagccttcccaatatgatgaaattctc
gatgatgaaaaagggcccaattatgaacagaaaaaatgggaagaagataaacttggccat
gcgcagatgagatttggcgctaaggatgcaaaagacaaaaataagcctgctgagtatgaa
cttcttgttgaagaagaacaaatcaactttgtgatggcacagcaaatccctggctcaaac
aaaccagcggagccacagatgtcagaaagtgaaagaaaaatgcagacgatacaggaggtt
cgacgaagccttcctgtgtatggttatagagaagagttactagaagcaataagcgagcat
caggtgttaataattgaaggagagactggctctggaaagaccacacagattccacaatat
ctttatgaagcaggctacactaaggacaagaaaaagataggctgtactcagccacggcgt
gtggctgcgatgagtgttgctgcgagagtgtcggaggaaatgggaactaagctaggcaat
gaggttggatatagcattcgttttgaagactgctgttcagaaaggacaatccttaagtac
atgacagatggaatgctgctacgcgaatttcttggtgaaccagacctcgctagctacagt
gtgatgattattgatgaggcccatgagcggacgctgcatacagatatcctgtttggactt
gtgaaggacattgctcgcttcagacctgacatcaagctcattatctcgagcgcaactctt
gatgctgacaagttctcatcgttctttgatgatgctcccatcttccgtattcctggcaga
cgcttccctgttgatatttactacaccaaggctcctgaggcagattacctagacgccacg
gttgtaacagtcttacagatccacattactcagcctgatggagacgtcctcgtctttctc
acgggccaagaagagattgaaactgcccaggaacttctgcaggacaggacacgtaaactt
ggctccaagatcaaggaactcatcatccttcctatttactctacactcccctcagatcta
caggcaaaaatatttgagcccactccccctggggctagaaaggtgattctagcaacaaac
attgcggagacttcattgacgatcgatggcattatctatgtgatcgatcctggattctgc
aaacaaaaaagctacaatccacgcacggggatggagtctttggtggtcacgcctatatct
aaggcgtctgcaaatcagcgtgctgggcgagccggccgtgtgaacgcaggtaaatgcttt
cgtctgtacaccgcatgggcctacaataacgaactcgaagagaacacgatcccggagatt
cagaggaccaacctcgggaacgtggtactgctgcttaagagtctgggaatcaatgacttg
atccactttgacttcatggatcctcctcctgccgagacgttgatattagcattagaacaa
ctgtatgccctgggggcgctcaaccaccacggagagctaactaagcttggacggaagatg
gcggagtttcctgtagatcccatgatgtcaaagtctcttatagcagcggagaaatacaaa
tgcgttgaccagatgttgaccataatcgccatgctctccgtcaacaatgccatcttctac
cgacccaaggacaaaatcgtgcacgcggacaacgcccggacaaactttttccgtccgggg
ggtgaccacctgacgctgttgaacgtgtacgaccagtgggcggagacggactactccacg
cagtggtgctatgagaactttatccagcatagatcgatgaagcgcgcgcgagacgtgcgc
gaacagctcgagggcttgatagagcgcgccgagatagagatgagttccaaccctggagac
ttcaccgccataagaaaggctgtcacggcaggatttttttaccacacggcacgtcttggt
cgcggagggcaatatcgcactgtaaaacaccaacagacagtgatggtccacccgaacagc
agtctgttccaggaacagcccaagtgggtcatttaccacgagctcgtctttactaccaag
gaatacatgagacaagtaatagagatcgacaatatgtggcttctagaggtagcccctcat
tactacaagaacaaagaggtggaagacagctcgtcacgcaagatgcccaaaaaggctggc
gttacagggcaacaagtcaggtccgtttga
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integrated database retrieval system
