Nematostella vectensis (starlet sea anemone): 116611549
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Entry
116611549 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 homolog
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
116611549
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116611549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ion_trans
Motif
Other DBs
NCBI-GeneID:
116611549
NCBI-ProteinID:
XP_032227832
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MKVMSYNLRDPDGEVHTNPSANGKAAIEMTQVNPIHVDQPPILPKLPELPIPVVSETPEY
SNITFHQAARDGRAELIEQRLNKLARHHSRKQLLLNRLDDDKTSPLHYAVRYGHLKVVKI
LVENGADINIPGEDGATPLHFAARFGVSSKLRRGMSREVMSSDINVAEVIQNALLKAAGS
DEALDIPEPTVEESQNAAIIQYLLSKDANVNVQDTYGLTPLHYAANKCNLNSTVELLKCL
AVKVDERDTSGGTALHSACTEGATEVAHALIKAGADIQAKDYEYMTPFHFACMEGHLETA
SLLLEAAEKIGGEGEVGLMLSNRNREKEAALHCAIDGGHKRAVKLCIDKGADVMAARSNN
TQPLHLAAVSGNVEIGKMLVEKGANIEGREANQETPLHRAACFNRIKFVEYLLDIGANIE
CKDKDNFTPLLSASSSGHTASIQLLMDRGANLRAKDTHDRTAIYMAAEENCVEALKELLK
HPFAKALVNEGDLYEDTPLHIAAMKGYLGVTEILLDHGARIDARNDEDYTPLHLAAKYGR
ARTAEALLRRDSDIVNDEDESSNTPLHLAAIEGNVKCVKTLLNHGAAVDARNANLWTPLD
CAAAYGWVKCASALLDFDSPVDPTDRTRTTPLHLASRSGHVDMVELLLNRNANIILTDHT
GRNCLDMAIDDGRKDVAMAIINSPNWEDVLKNKTLEQGTVTTPMRKLIDKLPDVAEAVLN
KCVTDNGLPLYHPEYKIDMNYEYLEDLYADWMDLNSSSMKGSETGSVSSFNIDRKSEYGY
QMIDEQNFEQVQKQLEWKSRHPLMIMVKRKREKLLSHPIVTSLLQHKWRTYGRYVYYLKL
FIYCVFLVFLTGYSVYDAQAKTSVNMTTCDYPASYSTGTPYDLWVRLGSIIILILACWHI
LMELFQMVYQRSSYIDWENLLEWIVYTTAIAFVAPEFQGVKEYGFSKCREWFSTVGAISI
WSAWMSLVLFIRKFPLFGIYVVMFTDILNTFLMFSTIFLLFIIAFALAFFTLFSAKVRHQ
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatgtcttacaatctaagagatcctgatggcgaagtacatacgaatccgagt
gctaacggaaaagcagcgatagagatgacacaagtaaaccctatccatgtcgaccagccg
ccaattctgccgaaactacctgaactaccgattcccgttgtatcagaaacacccgaatac
agtaatatcaccttccatcaggctgcgagagatggaagagccgagcttatcgaacagcgc
ttaaacaagcttgctcgtcaccacagtagaaagcagcttctgttgaaccgtctcgatgac
gataaaacgtcacccctgcattatgccgtcagatatggacatctgaaggtcgtcaagata
ttggtggagaacggggcagatataaatattcctggggaagatggggccacgcccttgcac
tttgccgcacgctttggggtctcttcgaagctccgtcgaggcatgagccgtgaagtaatg
tccagtgacattaacgttgctgaagtcatccagaacgctctgttgaaggccgcgggtagc
gatgaagccctagacatcccagagcctacagtggaagagtcacaaaatgcggctatcatc
cagtacttgctgagtaaagatgcgaatgttaatgttcaggatacctatggacttactccc
ctccactacgcggctaacaagtgtaacctgaactccactgtcgaacttctcaagtgcctt
gcagtcaaagtcgacgagcgagacacgagcggcggcacagctctgcactccgcatgtacc
gaaggcgctaccgaagtcgcgcatgcgcttatcaaggccggcgctgacatccaagcaaaa
gactacgagtacatgactccctttcacttcgcttgcatggaaggccacctggagaccgcg
tcgctcttgcttgaggctgctgagaagattggcggtgagggtgaagttgggttaatgtta
tccaacagaaacagagagaaagaagccgcgctccactgcgctattgacgggggtcacaaa
cgagctgtcaaattgtgcatagacaagggcgcagatgtgatggcggccaggagtaacaat
actcagccgttgcatctagcagctgtaagtggtaatgtcgagatcgggaagatgctggtt
gagaaaggcgcgaatatcgaggggcgtgaagcaaaccaggagactccactccaccgcgca
gcatgtttcaacaggatcaagttcgtggagtacttgctggacatcggagccaacatagag
tgcaaagacaaggataacttcacgcccctgttgtcagcaagtagttcaggccacaccgct
agtatccagctcctgatggaccgaggagccaacttgagagctaaggacacacacgaccgc
acagccatctacatggccgcggaggagaactgcgtagaggcacttaaggagttactcaaa
cacccgttcgctaaagcgttggtcaacgagggcgatctgtatgaggacacgcccctgcac
atagcggctatgaagggatacctgggagttacggagatactgcttgatcatggtgcacgt
attgacgcgcgcaacgacgaggattacaccccacttcatctggcggcaaaatatggacgg
gcaagaactgcggaagcattgttgcggcgggattctgatattgttaatgacgaggacgaa
tcttccaatactcctctccacctcgcggccatagagggtaacgtaaaatgcgtaaagacc
ctcctcaaccacggggctgctgtggacgctaggaatgcaaacttatggacacctttggac
tgcgccgcggcctatggatgggtcaaatgcgcaagcgctctactagacttcgactcacca
gtcgatccgaccgataggacccggactactcctctgcatttggcgtcacgctctggtcac
gtggacatggtcgagttgctgctgaatagaaatgcaaacatcattttgacggaccacact
gggcggaactgcctggatatggctattgacgacgggaggaaggatgttgccatggcaata
attaacagccccaactgggaggatgtgttgaagaacaaaactctagagcaagggactgtc
accacccccatgaggaaacttattgacaagctgccagacgtagcagaagctgtgctcaac
aaatgcgtgacggataacggcctacctctctatcaccccgagtacaagatcgatatgaac
tatgagtaccttgaggatctttacgctgattggatggatttgaattcctccagtatgaaa
ggctctgaaactggtagcgtgtctagcttcaacatcgaccggaagtccgagtacggctac
cagatgatcgacgagcaaaactttgaacaagtgcagaagcagcttgaatggaaatcgagg
catccactgatgataatggtaaaacgcaagcgggagaagcttctaagtcaccccatagtt
acgtctcttctccagcacaagtggcggacgtacgggcgttatgtttactaccttaagctt
tttatctactgcgtcttcctcgtattcttaaccgggtactcagtctacgacgctcaggcc
aaaacctctgtcaacatgaccacatgtgattatcccgcctcctatagcaccggcacgccg
tatgacctttgggtgcgactaggatcaatcatcatccttatactggcttgttggcatata
ctcatggagttgttccagatggtatatcagcgttcgtcgtacatcgactgggaaaacctc
ttggaatggatcgtgtacacgaccgccatcgccttcgtcgcgccagaattccaaggtgta
aaagaatacggattcagcaagtgtcgggagtggttcagtacagtcggcgccatctccatc
tggtcggcgtggatgtcgctcgtgctgtttatcaggaagttcccgcttttcggcatctat
gtcgtcatgttcacggatattctcaataccttcctcatgttttccacgatcttcttgctg
tttatcatcgccttcgcgctcgcgttcttcactttattctcggctaaggtgaggcatcag
aggtag
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