Nematostella vectensis (starlet sea anemone): 116616984
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Entry
116616984 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
116616984
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116616984
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116616984
NCBI-ProteinID:
XP_032235181
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MSLGLLKSPFRKRHRAPFHNKKPLQDPVDGTKGQVNVNIADADQPIPLTRTQRPTSILSA
IKDGQTNCVSEFLAREEYRREVNELDSLGLAFLHHAARYDRAEIVVVLVENGSDVDVRSD
EGLTPIQVAIRCDSVNTIKRLLELGADPETPDHHGNTALHHAVLQANVHVTKLLLDYPQV
HADARNTVQQTPLHLACHLGNLELSEVLISHGVDLRAQASGHLTPLHMAASSKNLKIVKL
IVEKALAQEIPAVTLMSDKDIDGNTAFHLAVKAADHNIAGYCLEKGACVNATLNCGSTAL
HVAAAKGSLECVRLVVEHGAPVNVVDINHRTPLHSAAMMGCTSVIRFLVQHGADLEAVDS
DHFTPFLTAVQSGSCYAVEELWNLGANAAATDTLSRNCLQICIEYAHPEALDKLLTISSQ
MCLSRADIDNKSAIHYAAVTDNYKILETVLSFGPNASPRDSSQQTPLHLAAARGLVQHVE
ALVRYAAGVNERDDQGRTPLHLAAAGGWKKVCSVLLRSGSDVNAKDAKRATPLMLAAQHG
CPKTCQLLLDNQASIVEVTIDMETALSSAIKSNSPGCVELFLDRGAGINVEFDVSCLSVA
MAIVNHERWEEILQHNHDLMRDLIQRFPAAAQIVMDKCIQHTGRPSDPDFTITYDFRFLN
SDPDSVEATTGHPFFAPTTMIKHAREDLLLHPLTEKFLATKWRNLGRYAYLFNCAVYIVF
LVVYSIFLITESSKPYFGSTNTSTRAAIDLFTAPENATMLRAKWISLVLTCFFFVKELSQ
IVFQGRGYFKESSNIADWLLIVFTLLYLAPYFLSAEQLESITGDARNGGQYFWSFGLVSI
FFTYFNLVLFLRRFEMIGLYIAMLLGVAKTVFRAFMAFSVFILAFAVAFSVLLNKQPSFQ
NFGYSILRVIVMTTGDLNYDDTFVNSVGKRDSAGSLLNPIPLVAFLLLFFFIVFSVIVMM
NLLVGLAVGDIEAIRRQGTLNRLSMMVSYAASLEQKYPRLLLRWVYKDRLVEQPNRSKLK
RALRESTLKKAFESALDDGDNAKGISDVNDVIKQDVIKNKQRIKAIIMMIEAQNKLLSDL
ASKDGRDARGTDGGLGQEDNLSSMSEICDAFKRSTDNKL
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggggcttctcaaaagtccttttagaaaacgccaccgggctccatttcacaac
aaaaaacctctccaagatcctgttgacggtactaaagggcaagttaatgtcaacatcgcc
gatgcagatcagccgatcccgctaacacgtacccaacgaccgacatctatccttagcgcc
atcaaggacggacagacgaattgtgtatctgagtttctcgcccgggaagagtacaggaga
gaggtgaatgaacttgactcattagggctcgcatttctgcaccacgccgcgagatatgat
cgagctgagattgtggtcgtgctggttgagaacggatctgatgtcgatgtgcgttcagac
gagggactcaccccgatacaagtcgctataaggtgcgatagtgtaaacactattaagcgt
cttctcgagctgggcgccgaccccgagacccctgatcaccatggcaacacagcgctgcac
cacgctgtgctgcaggcaaacgtgcacgtgaccaagcttctcctggactacccccaggta
cacgcggacgccagaaacacagtccagcagacaccattgcatctggcgtgccaccttggt
aacctcgagctgagcgaggtattgatcagtcacggggtggacctcagggcgcaggcatct
ggtcacctgaccccactgcatatggcggcatcgtcaaagaaccttaagatagtcaagcta
atcgttgagaaagcgttggcacaagaaataccagcggtcacactaatgagcgataaagac
atagacggcaacactgcattccacttagccgtaaaggccgctgaccacaacattgcgggc
tactgcctggagaagggtgcctgtgtaaacgcgacgttaaattgcggaagcactgcgctc
catgtggctgcggctaaaggtagcttggaatgcgtgagacttgtggtagaacatggagcg
ccagtgaacgtcgtggacattaatcacaggacaccgttacatagcgccgccatgatgggc
tgtacaagtgtgatacgattccttgtgcagcatggcgctgacctggaggccgtggattca
gatcacttcacgccattcttgaccgcagtgcaatctgggagctgttacgccgtagaagag
ctatggaatctaggagctaatgcggctgccacggatacattaagccgtaactgcttgcaa
atatgcatcgagtatgcacacccggaagcgttggataagctcctcaccatcagtagccag
atgtgtctctcacgcgcagatattgacaataagtccgccatacactacgccgccgtcacc
gataactacaagatcctggaaacagttctcagctttggtcctaatgcgagcccacgagac
agcagtcagcagactcccttgcaccttgcggccgcgcggggcctggttcagcacgtggag
gctctcgttagatacgcggcgggagtaaacgaacgcgacgatcaagggaggacgccgttg
caccttgccgccgcaggggggtggaaaaaagtctgctccgttctgctgcgatccggaagt
gacgtcaacgcaaaggatgctaagcgcgcaacaccgctgatgctcgcggcgcaacatgga
tgccccaagacttgccaacttctccttgacaaccaggcatcaattgtcgaggttaccata
gatatggagacagctcttagctctgctatcaagagcaatagcccagggtgtgtagaactt
tttctggatcgcggggcaggtatcaacgtggagttcgacgtcagttgtttatcggttgcc
atggcgattgtcaatcatgagagatgggaagaaattctccagcataaccacgaccttatg
cgcgatctcatccagcgtttccctgctgctgcgcagatagtgatggataagtgtatacag
cacacagggcgcccgtctgatccggacttcacaatcacatacgattttcggttcctcaat
tcagaccctgactccgtcgaagccaccacagggcacccatttttcgctcctacgacgatg
ataaaacacgcgcgagaggatctgctgcttcaccctttgacggagaagttcctcgcaaca
aaatggcggaaccttggccgctacgcctacttatttaattgtgccgtatacattgtgttc
ttagtggtatacagcatcttcttgattacagagagctctaaaccatattttgggtctaca
aacacttctactcgggcggcaattgatctatttacggctcctgaaaacgcaaccatgtta
agagcaaagtggatctcactcgtactcacgtgcttcttctttgtaaaggagctttcgcaa
attgtgttccaaggaaggggttacttcaaggagagtagcaacatcgctgactggctgctg
attgtctttaccttgctttacttggcaccgtatttcctctcggctgaacaactggaatca
atcacgggcgatgcacgaaacggtggtcagtacttctggtcatttggacttgtttccatc
ttcttcacgtacttcaacttggtactgttcttgcgaaggttcgagatgattggtctgtat
atagcaatgctgctgggagtagccaagaccgtttttcgagcgttcatggcattttctgtt
ttcatcctggcatttgctgtggcattttctgtgcttctaaacaagcagccctcgtttcaa
aactttggttactccattctccgtgtaatcgtcatgacaaccggggatctcaattacgat
gacacctttgtgaattctgtcggcaaaagggacagcgctgggtccctgctcaaccctata
ccattggtggcctttttgttgttgtttttcttcattgtcttctccgtgatagtcatgatg
aatttactggtgggtcttgccgtcggtgatattgaggccattcgtcgacagggcactctg
aaccgtctctccatgatggtgtcgtacgcggcgtctctagagcagaaatacccgcgtctt
ttgttgcgatgggtctataaggatcgtctggtagaacaaccgaaccgcagcaagctaaaa
cgcgccttacgggaatcaactttaaagaaagcattcgagtcagctcttgacgatggggat
aacgccaagggaataagtgatgtgaatgacgtcataaagcaagatgtcattaaaaataaa
caacgtattaaggctatcatcatgatgatagaagcgcaaaacaaactgcttagtgaccta
gccagcaaagatggacgggacgcaaggggtacagatggagggttgggccaagaggacaat
ctgtcctcaatgtctgagatatgtgacgcctttaaaagatctacagataacaagctttga
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