Nematostella vectensis (starlet sea anemone): 116619112
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Entry
116619112 CDS
T01037
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116619112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nve03032
]
116619112
03029 Mitochondrial biogenesis [BR:
nve03029
]
116619112
Enzymes [BR:
nve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116619112
DNA replication proteins [BR:
nve03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
116619112
Mitochondrial biogenesis [BR:
nve03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
116619112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
116619112
NCBI-ProteinID:
XP_032239402
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
MATMLQLSGLVPRYISKSNVLGRVVPHVLGRRHRSDDLPRYNPVNIQMLSASLHEQLFPD
TPANTQSTDVIQKCIEHLSAHGLWGKAKSAARDVDMTLPPLLGENIDDHFRTIARQQSKA
YYDMSQDIASSSLPSVPDMWEFRAGWCRYAEDADGLHVTQVECPPDDALVFDVEVLQSEG
LSPTLAVAASPSAWYSWVSPRLVKDKSYQWIVQPRPDLYIPLETSDGKETHWRERLVIGH
SVGYDRSYVKEQYYIKGPKTYFLDTLSLHMCVSGLTGLQRHLWTAANSGRKTRQDWMQAG
AGNKLVDLYALYCDGEAVDKSLVDVFIHGDMGDVRAQFQDLMAYCAKDVSLTHEVFAALW
PFFLERFPHPVTFAGMLEMGSAYLPIDQSWDSYLRDCNDTYEDLEQEMKGSLMHLADEAC
NYHHDRRYSRDPWLWSLDWSVQDVRTKVPKKPKKPRKKKTSASAATITLDRMESDSLECP
SHNELIHNEDKEEVFDEWNLIKMEKYGMLGNAARDTGSCEEAHDQSEKTTQLLSAIPPAK
EIMYKRRQHLPGYPLWYRKLCPKNGEGASLVSPQCQTAPLLLRMTWDGFPLHYSRKHGWG
YLVPGRTDNLHPRDPGEETAEKLERPGPDTPFPTNVFQSLWQQHRMNPLTSSPSPSPLDD
EELDIRHLTDSDMWSEYEYQEIKANGKQQGLEGGSPRQEGCESGLQGSSPGREGVQCIKL
QSTKKKLDSDWRHSKPPSYHGVGPFNDVDLPGVWFFRIPHKNGDQYRCGNPLAKDYITKL
DDKTLVSAGDRSARRTLVTNKMISFWRNAHKRITSQMAVWFGADDLPDQVKRSAQFSSHN
TYGAIVPRVISAGTVTRRAVEPTWLTASNPREDRVGSELKSLVRAPPGYSLVGADVDSQE
LWIAAVLGDANFAGIHGCTAFGWMTLQGQKSDGTDLHSKTADTIGISRDHAKVFNYGRIY
GAGQKFAERLLLQFNHRLTDTEARQKAERLYSSTKGTARYVLSDYGHEVAHEFGIPVDED
GCVETRVYWELVRRTTRRRRNKNFKKSIEAGRRWHGGSESEMFNKLEMIAQSDEPRTPVL
GCRISRALEPWVVGGAFITSRVNWVVQSSAVDYLHLMLVSMKWLFTEYGIDGRFCISIHD
EVRYLVAEEDKYRAALALQITNLLTRAMFAYKLGMNDLPQSVAFFSAVDIDKVLRKEVNL
DCKTPSNPQGLQKGQGIMPGEALDIHQILQKTNGCLRKVEHLNVQDSVQYTLH
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaatgttgcagctttctggtctagttccaagatatatcagcaagtcaaatgtc
ctgggaagagttgtcccacatgtgttgggtaggagacacagaagtgatgatctgccccgt
tataatcctgttaacatacaaatgctgtctgcctccctccacgaacagctcttccccgat
acaccagctaacacccagagtacagatgtcatccaaaagtgcattgagcacctgagtgct
catggattatggggcaaagcaaaatctgctgcaagagatgtagacatgactctccctccc
ctcctgggggaaaacattgatgatcatttcaggactattgcgagacaacagagtaaagca
tactatgatatgtcacaggacatagcatcatcgtcattgccgtcggttcctgatatgtgg
gagtttagggcgggctggtgcaggtatgcggaggacgctgatggtctacatgtcacccaa
gtagagtgtccgcctgatgatgctttggtctttgatgttgaggtgttgcaatctgagggt
ctttccccaacactggctgtagccgcctccccttctgcatggtactcatgggtcagccca
cggcttgttaaggataaaagttaccagtggattgtacaaccaagacctgacctttacata
cctcttgaaacgtcagatggcaaggaaacccactggagggaaagacttgtgattggtcac
tcagtcggctatgataggtcgtacgtcaaggaacaatattacattaagggtcccaagaca
tatttcctggacaccctcagccttcacatgtgtgtgtctggactgacaggcctgcagcga
cacttgtggacagctgccaactctggccgcaagactcgtcaggactggatgcaggccggt
gctggaaacaagcttgtggatctgtatgctctctattgtgatggagaagcagtggataag
tccttggtggacgtgttcattcatggtgacatgggagatgtacgagcacaattccaggat
ttgatggcttactgtgccaaagacgtttctctcacccatgaagtgtttgcagcactatgg
ccattctttctagagcgcttcccgcaccctgtcacctttgccggcatgcttgagatgggc
tctgcctacctccctattgaccagagctgggacagttatctacgggactgcaatgacacg
tacgaggaccttgaacaagagatgaaggggtctctgatgcacttggctgacgaagcatgt
aattaccatcatgatagaaggtatagccgtgatccatggctctggagtctcgactggtcg
gttcaagacgtgcgcacaaaagtcccaaagaagccaaagaagcccaggaagaagaaaaca
agcgcctcggcggccacgatcaccctggacaggatggaaagtgatagcttagagtgccct
tctcataatgaactaatacataacgaggacaaggaagaggtatttgacgagtggaacttg
atcaagatggagaaatatggcatgctgggaaacgccgcacgtgacacaggttcatgtgaa
gaggcacatgaccaatcagaaaagacaacccagcttttgtctgcgatccccccagcaaag
gagattatgtacaagagacggcagcatttacctggctaccctttgtggtaccgcaaactc
tgcccgaagaacggtgaaggagcctcgctcgtgagcccgcaatgccagacagcgcccttg
cttttgcgcatgacatgggacgggttcccgctgcactatagccgcaaacatggctggggg
tatttagttcctggtcgaacagacaatcttcatccacgtgaccccggggaagaaaccgcg
gagaagcttgagaggcctggacccgatactccattcccgacaaatgtattccagtcgcta
tggcaacagcaccgcatgaatcccttgacctcctccccctccccctcccccctcgacgac
gaagaacttgacattcgccacctgacagacagtgacatgtggtctgaatacgagtaccaa
gagataaaagccaacgggaagcagcagggcctggaggggggctctcccagacaggagggt
tgcgaatctggactgcaagggagtagccctggtcgggagggggtgcaatgtatcaaacta
cagagtacgaagaagaagttagattcagactggaggcatagcaagccgcccagctatcat
ggggtggggccctttaacgacgtagatctgccaggtgtctggttcttccgtatcccgcat
aagaacggtgaccagtaccgttgcgggaaccctttggcgaaggattacatcaccaagctg
gacgataagaccctagtttcggctggtgaccgcagtgcacgacggaccctcgtgactaac
aagatgatctcattctggagaaacgcacacaagcggatcacatctcagatggccgtgtgg
tttggcgctgatgatttgccggaccaagtaaaaagatctgcgcagtttagcagtcacaac
acttatggagccatcgtcccccgtgttatatcagcgggaaccgttacgagacgagcagtg
gaacccacttggctaaccgccagtaatcccagggaggaccgcgtgggttctgagctgaag
tccctagtgagggcccctccagggtactcattggtaggggctgatgtggatagtcaggag
ctctggatcgcagcggtgctgggagatgcaaactttgcgggaattcacggctgcactgcg
tttggttggatgacgctgcaagggcagaaatcagacggcactgacttgcacagtaagacc
gctgacacgatagggataagccgagaccacgccaaggtgtttaactacgggcgtatttac
ggcgcggggcagaagttcgcggaaaggctgctgctgcagtttaatcatcgcctgaccgac
acggaagcgaggcaaaaggctgagcgactttactcaagtactaagggcacggcgcggtat
gtgttgtcagactacgggcatgaagttgctcatgagtttgggatccctgtagatgaagat
ggctgcgtagagactcgggtctactgggagctggttagacggactacacgaagacgaaga
aacaaaaatttcaagaaaagtatcgaggctggtcgaagatggcacggaggaagtgagtct
gagatgttcaataaactggagatgatagcccagtcggacgagccccggaccccagtgctc
gggtgccgaataagccgcgccctggagccgtgggtagtgggcggtgcgttcatcactagt
cgagtgaactgggtggtccagtcctccgcggttgactacctccatctgatgcttgtatct
atgaaatggctcttcactgagtatggtatcgatggcaggttctgcatcagcattcacgac
gaggtgcgttacctcgtggcagaggaggacaaataccgcgcagccctggcactacaaatc
accaacctgctgacgcgtgcaatgttcgcgtacaagctgggcatgaacgacctgccacag
agtgttgcgttctttagtgctgttgatattgataaggtcttgcgtaaggaggtaaacctg
gactgtaagactccctccaatcctcagggactgcagaaaggccaggggattatgccaggc
gaagcgttggacatacatcagatcttacagaaaacaaatggatgcctcagaaaagtggaa
catttgaatgtgcaagacagtgttcagtacaccttgcattga
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