Nematostella vectensis (starlet sea anemone): 5501204
Help
Entry
5501204 CDS
T01037
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5501204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5501204
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
5501204
mRNA degradation factors
5'-3' decay
Decapping complex
5501204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Hira
Motif
Other DBs
NCBI-GeneID:
5501204
NCBI-ProteinID:
XP_032225436
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MKPNLEQISADIFLNFGNRQRSPGHELTGMDDATGKATKFLLNMLNIGGNDKGPGPTTGS
AELTNEDVEKDAEENASECSGSFISPTASPLRQSTKTMSEMSEGEITSSLLDGSTPRISL
HSIKQLIHLAGDDRTSSISVYGNQVEIVTGQSALASSTATASNKIKINPMVNYDWDMKYY
RGSLIALGSKFIAYTLKGRNGYVVRLLNPETATRALIKGFIGLVTDLAFAHANSNTLACV
DEGGNVYVWSVQEEDGKIEYNLKLRVNRSPHPTSEYHRVIWSPYLPEEGEVDVDEMEEDE
RPLAVTHHNQAEVIDIPMVIARCGCNEVTEGMLQEGEGYILISEGHTKPITDASLSPDGA
VLATGSEDGYVRFWSVGDMLPDSAPSCLHEYQPHEGSPVSLLTFCDNHTVQEKDVPMWRF
MVTGAEYNREIKIWCTVTWTCIQTLRFTSPTADIANVLGESYFKARLDATAKYLVFSDIG
RKVLYILLVHQDREAGRAHISSITDFQLTQPLLSFMITKAKLFKTKQDVNQHLQNGEGSN
GHDMNGDDVHDEGMEELLDESELEFEERRKNLLVQLRLYSIHTKSLQELLVHFQPEPSIP
PPTPSNMSSIVTSIGLGVKDGLSDLSGMETGTEASTDVDESDPGPPDTPGSSHHKLITPD
AFTKGSSRPESMTSSITTVSALPNASGVDMPLDGSVSSNLSDTTVKSSLAESLRDTPRSS
FSDNRVLTPTSLPLPPTPPSQPPPEVPTSQAHPDKRSLSPTSLPIPDTPLLSAAPDASMV
PIPKFQSLLDDQTNSEDDIAGLSSEISNNKKEEGGGLEGTTQRQSVSSSTSSTPKEPIPI
KEVLAMDSSSSEGAVKLEDRRHRNASEESEEATEAWSTPIAQTRTITDIQKSKPKHNLIT
SPATARVDIPPDSTSAVRPEDPSILQLIELIQQQHSEISRLRAELKESQEQHRYEVTRLL
QGEIGRLEDTVTERLREALAHHSLEENQRLEKALRDKQSQDKKRHEQLTSTLSQSVTNAL
TGKLEKTVKQEVKGSVVPAVQKAMVPVQDQLNTTIAQKLTAADAVFKDSVGKMMKSKAVI
DSIGSSAAAALQGPIQGSYREAFQSTILPAFERSCHSMFQQINDAFHRGTQQYLERVTAT
LENQRREQQEARDPVVQQLQAQVQSFQSESQRLRNTMTTMTSEMTSEMEVLLQKQLASSM
HSLREELVSKLETQVTSNIQQVIQEEIRLGMQDLGPRYQPDPPAKMGTRHDYEQIQRRIQ
VCLGEGQLAMAFQEALTAADLSLVTMVCESVDVNELFSQTEPLPLSQPVLLSLIQQLSVD
LLTNTQLKHRYLEEAVMALDTTNEVTSEHMPAVIQGLVEQLTIAIPRCSGISERSLQMAA
QSLTSQLEGLVVQLNMVTPPFSVITQ
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaatttggagcaaatttctgcggatatttttctaaatttcggcaatagacag
cgttcgccaggtcacgaactaacaggcatggacgacgcaactgggaaagcaaccaagttc
ctgttgaatatgcttaatatcggtggaaatgataagggtccggggcctacgacgggttct
gctgagctgacaaatgaagatgtagaaaaagatgcagaggagaacgcaagcgaatgtagt
ggctcctttattagtcctactgcgtcaccactaagacagtctaccaagaccatgtcagag
atgtctgaaggggaaattactagcagtctcttagatggatcaacacccagaatctcttta
cactctatcaaacagttgatacacttggcaggggatgaccgtaccagcagcatctctgtg
tatgggaaccaggttgaaatagtgactggtcaaagcgccctggcatcttccacagctacc
gcaagtaataagataaaaatcaacccaatggtcaattatgactgggatatgaagtactac
agaggaagtctcattgctcttggcagcaagtttatagcatacacactgaaaggtcgcaat
ggctatgtagtgagacttctcaatccagaaacagccactcgtgcattgatcaaggggttt
atcggcctagttactgacctggcctttgcccatgcgaattccaacacccttgcctgtgtt
gacgagggtggtaatgtttatgtgtggagtgtacaggaagaggatggcaaaatagaatat
aacctaaagctaagggttaacaggtcacctcatccaacgtctgaataccaccgcgtcatc
tggtccccctacctgccagaggaaggtgaagttgatgtggatgagatggaggaggatgag
agaccccttgcggtcacccatcataaccaggctgaggtgattgatatccctatggtgata
gcgcgctgtggctgtaatgaggtcacagaaggcatgctgcaagaaggagaagggtacatc
cttatttctgaaggacatacaaagccaataacagatgcatctttatctcctgatggggcc
gtgctggccactggtagtgaggatggttacgttcgattctggtcggtaggagacatgttg
cctgactctgccccgtcctgtcttcatgagtatcagccacatgaaggctcacccgtgtct
ctccttaccttctgcgataatcatactgtgcaggaaaaagatgtgcccatgtggcgtttt
atggtgaccggtgctgaatataaccgagaaatcaagatttggtgcacagtaacatggaca
tgcatccagacactaagatttaccagtcctacagctgacattgcaaatgttctgggggag
tcttatttcaaagcacgactggatgctactgcaaaatacttggttttttctgatattggt
agaaaggttctgtacatccttcttgtccaccaagacagagaagcagggagggcacacatc
tcatccatcacagatttccagctgacacagcctctgctcagtttcatgatcaccaaagcc
aagctgttcaagaccaaacaagacgtgaatcaacatctgcagaacggagagggcagcaac
ggccatgatatgaatggggatgacgtccatgacgaaggaatggaggagcttttggacgag
agtgaacttgaatttgaggagaggaggaagaacttgttggtgcagctcaggctgtattct
attcacacaaaatctctacaggagctcctcgttcactttcagcctgaaccatccattccc
ccacccactccctcaaacatgtcttccattgtgacttccatcggactaggtgtgaaagat
ggtctgtcagacctgagtggtatggaaacaggcacggaggcgagcactgatgttgacgag
tcagatcctggtcctcccgacaccccaggatcatctcaccacaaactaatcacccccgat
gccttcacaaagggttcctcccgcccagagagcatgaccagtagcatcaccactgtatct
gccctccccaatgcctcaggggtagacatgcccctagacggatcagtatcctccaatctc
tctgacaccaccgtcaagtcgagcctcgccgagtccctcagagacacacctaggagctct
tttagtgacaatagggttctcacaccaacatcactgccgcttccaccgactccaccctca
cagccacctccagaggttcctacctcacaggcacatccagacaagaggagtctttcacca
acttctcttcctattccggacacacctcttctctccgctgccccagatgcgagcatggtt
cccatccctaagtttcagtcccttcttgatgatcaaacaaattctgaagacgatattgct
ggtttaagctcggaaataagtaataacaaaaaggaggagggtggaggtctagagggtaca
actcagaggcagtctgtaagctcctccacaagttctacacctaaagaaccgataccaatt
aaagaggttttggcaatggattcaagtagcagtgaaggtgcagtcaagttagaagacagg
agacacagaaatgctagtgaggaaagtgaggaagcaacagaggcctggtccaccccaata
gcacagacaagaacaattacagacattcaaaagtcaaaacccaagcataatctaattaca
tcaccagcaactgccagagtggatattcctccagattcaacttcagcagtgcgaccagag
gacccctccatcttacaactgatagagctaatccagcaacagcacagtgagataagtaga
ctgcgagcagagttgaaagagtcccaggagcaacatcgatatgaggtgacacgcctactg
caaggagagatcggtaggctggaggacaccgtcacagagaggctgcgtgaagctctcgct
caccacagtcttgaggagaaccagagattagagaaagctcttcgggataaacaatctcaa
gacaagaaacgtcacgagcagctcacaagcacactctcgcagtcagtgaccaacgccctg
acgggtaagctggagaagacagttaaacaggaggtcaaggggagtgtagtccccgctgta
cagaaagctatggtaccagtacaagatcagctaaacaccaccatagcccagaaacttaca
gcagcagatgctgttttcaaggacagcgttggcaaaatgatgaaaagcaaggccgttata
gattccattggcagctcagcggctgcagcccttcagggccccatacaggggtcgtaccgc
gaggccttccaaagcacaatccttccggcctttgagcggtcctgccactccatgtttcag
cagattaatgacgcattccatagagggactcagcaatacctggaaagagtcactgcgact
cttgaaaaccagcgccgcgaacagcaggaagcccgcgatcctgttgtccagcagctacag
gcgcaagtccagtcattccagtccgagtcgcagaggcttcgcaacaccatgacgaccatg
acgtcagaaatgacgtcagagatggaggtcttgttacagaaacagctagcaagctcaatg
cacagtttgcgagaggagttagtgtccaagcttgagacccaggtgacctccaacattcag
caagtgatccaggaagagattcgtcttggtatgcaagacttgggcccacgctaccagcca
gatccccccgccaaaatgggcacgcgacatgactacgagcagatccagcggcgtatacaa
gtgtgtcttggcgaaggtcaattggccatggcttttcaagaggcgctgactgccgctgac
ctgagcctggttaccatggtgtgcgagtcggtggatgtgaatgagctgttctcacagacc
gagccactccccctctcgcagcctgtccttctgtcgctcatccagcagttatccgtggac
ctgcttaccaacacacagctcaaacacaggtatctcgaagaggctgtcatggctctcgac
accacgaatgaagtaaccagtgagcacatgccagccgtgatccaaggcctggtcgaacaa
ctcactatagccatccctcggtgcagcggtatttccgaacggagtctgcaaatggctgcc
cagtccctcacttcacagttggaaggcctggtggtacagctgaatatggtcacccctccg
ttcagcgttatcactcagtga
DBGET
integrated database retrieval system
