Nematostella vectensis (starlet sea anemone): 5501520
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Entry
5501520 CDS
T01037
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
5501520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nve03000
]
5501520
03021 Transcription machinery [BR:
nve03021
]
5501520
03036 Chromosome and associated proteins [BR:
nve03036
]
5501520
Transcription factors [BR:
nve03000
]
Eukaryotic type
Helix-turn-helix
ARID
5501520
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
5501520
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
5501520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
5501520
NCBI-ProteinID:
XP_032225700
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MLANGSTRPSFPYSGTNNSSVSEETNTALKFAQGTANYSKRSKLSDDGLDSLTRRDQEIL
QELEEYIVEGPNRQPYTTLHNNNNTGFWTNKMATANTNGPSQALSNTNGFQLPIESNTSL
QSKATPGVNLLSHMNNQFSDQGNLGISGHANPSSSLKMLPGGQTNPSLPPTNQYNQYSQR
QEHLMRGFQGNNGAGSHDISASPLMRSSEQYTTPQRSYMSANNDTQMRSVNRQSPSPFSQ
NYFPQESHNTHSTNRTSSTSADDRGLSSSEHFPWLPNRYQTSISQTNSSISPAISRTQNP
ASPMPPRRPSYMGQNIQYPTTPPQQPGQPHPYMMSPSMKPMPQTQQYYNNMGMPPSMMGP
SHNPMGMPQRQGTMANQVAKSQPDMTPYQQQQYQQRFPQPNYPPQLPPYMASRQSQNPNP
MSRVPMQHHQPILPKPAVDMFGSPSTGPRYPSSVPDSSMVSDFPGPIIGDASPSGPPPLH
RQPFPATGMPPDRQNQPQYSRGFPPFQSPLQGGSSSPNVTLGSPMRNLSEGFPGGNPLQG
SGPVPPPAYPTRPSSNPPNTFPAESPLSHSGAAAAAAAALAAASSMTYPGMGPMEQSGPP
SYGSQESGIGSRGSMGVVPSPRSGTPNLSMQGVDASSSINSVKTGRVPSPSLNQLPTAED
VETMIKMMGSGECLDRSPPSSRSSSPTTMSELNNGNHSGPATPIQTVAATSADSPMSTFS
GLSVKAGITGLSSPSSSFGDDQDEDIPVDAITPTLTGAPLPSYNQDQSKPSFQQAKFALL
YQLDDNPDRRNFLDKYASFMESSGAPVTHVPVINNEPLDLFKFYRAVRESGGLQEIVKKK
SWDSVIFNMGAPLQLSNILRTQYARLLLSYEMKDSQGGNVDGILKNDLEDSGIPPPNAMV
TCTEAIIPSASVTTSIPGDSYNSGYNHMNGPQGYNGPQTYEGHQEGYEGSKGFMNDTMDP
RHTAPPQLPNMGGYNMPPYNMMGNERSSYPGYPSQSFQSAPNTQFTGAAALSQLAYQRNQ
QAMQGYPGMPPRRPSHMGQQAPMMSSPGPQDPMTAVWPGSQYNASSEPVQMFDYLPPGQS
GRSMRPSMPQYPQAPPYNSYQSRQQYPPMPPYRPSSPHVQSSASPSMQRPQMVQSQGVLP
QQLSPKPKYNQSQQHSGHMKREVGFPADCVEGTRPVFTKKRKLTSRDLGPVEAWRVMMSL
KSGLLAETTWALDTLNILLYDENTVGYFVLSHLPGLLDNLLDHFRCYLAQIFGKMSDIEV
GLGTAFLHKPSKRRAKPDEKKSPDEKLEEDSCRSLTAFIASASIDHPDEGFVSRARMWSR
GGSDVTTHIQTHVGTATSPRKALHRKAHARTAIAPVEKAATHSPENDACQPDKITCSKDN
VPCSKDDITCNKDSIACSRERVACLNDNVMCLKDNVMCSKDAVTCQNRSVTCPKYSVLCP
DSNVEPNETSVNDKCNGANDSSDDNTSAVRKVDIKTEALSDNIQSINDVKTNCDSVASSR
ESRTKNECQIKTESGEKCESKCCAEDTWKGGVKLENCVSESLSKDWELDSDSSSEMDPDS
DDVDVRNDDSLTEEERFTRRLKKELDLLIDFESDGDETDAYIESLVASKVRQDRGACVHE
QECVRKEDAPLCLRTESDDAISRRCICVSNILRGLSFVPGNDIEMHRHAGLLLILGRLLL
LYHEHAHRVPYKRTYLQVDEEPDVPVDDRDDWWWHCLEVLRENALVILSNIAGQLDLTFY
SDTIRASVLEGLLHWLVCESADALDPMPTATPSTSLSAQQLVLEALAKMSILGGNAELII
STSSSPQLVLIHDTLVRLLGSRGNPVCRELTLVLLSNLSQSDNEFANLGDKKQCIAMLLQ
FIEDAANSINAYSSGSSLAQGGYTSEDFCGTSVDMLRRAASTLVCLSRCKSNKAVFLPFQ
DRLLVLTTLRLLDGMIGSHLADVLYYLSR
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgttagctaatggttctactagaccatcatttccctattcgggcactaacaatagttcg
gtctcagaagagaccaacacagcgcttaaattcgcacagggaactgcgaattattccaaa
aggagtaaattatccgatgatggcctggattcgctgactcgaagggatcaagaaattcta
caggaattggaagagtacatagtcgagggaccgaacagacagccatacaccacactacat
aacaataataatactggattttggaccaacaaaatggcgaccgctaatacaaatgggcca
agtcaagctttatcgaatacaaacggcttccaattgccaatagaatctaacacaagtcta
cagagtaaagctacgccaggggtgaatttgttatcacatatgaataaccagttttctgat
caaggaaacttgggcattagtggtcatgcgaatccttcttcgagtctgaaaatgcttcca
ggagggcagacgaatcccagtcttccccctacgaaccagtacaatcaatatagtcaacga
caggaacatctaatgaggggttttcagggcaataacggcgctggttctcacgatatttca
gcatcaccgttgatgcgtagttcagaacaatacaccactccacaaagatcttacatgtct
gctaacaacgatacgcaaatgcggagtgtaaatcgacagtcaccaagccccttctctcaa
aattatttccctcaggaatcacataatacacactcaacgaataggacatcctctacatct
gcggatgatcgtggtttaagttctagtgaacattttccctggctacctaaccgataccag
acgagcattagccaaacaaattcatctatttctcccgcgatttctagaactcaaaacccg
gcctctcccatgcctcccagacggccatcttacatgggacaaaatattcaatacccaaca
actccaccacagcagccaggccaacctcacccatacatgatgagcccctccatgaaaccc
atgccccaaacacaacagtactataacaacatgggtatgcctccaagcatgatgggaccc
agccataaccctatggggatgccccagcggcagggtactatggccaaccaggtggccaag
tcgcaaccagacatgaccccctatcagcaacagcagtaccaacaacgattcccacagccc
aactaccctccacagttaccgccatacatggcctcacgtcaaagccaaaaccccaacccc
atgtcaagagtaccaatgcagcaccaccagccaatcctaccaaagccggcagttgacatg
tttggatcaccgtctacagggccccgttaccccagcagtgtaccagactcgtctatggta
agtgattttcctgggccaataatcggtgacgcatcaccatccggaccgccaccactgcac
cgtcagcctttccctgctacaggtatgccacctgatcggcaaaaccagccacaatactcc
cgaggcttcccacccttccagagtccattgcaaggtggttcatcttcaccaaacgtcact
cttggatccccaatgagaaacctgtcagaaggttttccaggaggcaaccctctacagggg
agtggtccagtacctccacctgcctatcccacccgtccctcctccaaccctcctaacacc
ttccctgccgagtcgcctttgtcccacagtggagcagcggctgcagcagcagcggcactg
gcagctgctagctccatgacctatcctggtatgggacctatggagcagtccggaccacct
agttatgggtcccaagaaagtggtatagggagcagaggctccatgggggttgttccgtcc
ccaaggtcaggcacgccaaacttgtcaatgcaaggagtggatgcaagctctagtatcaac
agtgttaaaacaggtcgagttccatcacctagtctgaaccagctgccgactgcagaggat
gtggagaccatgataaagatgatggggagtggggagtgtctagaccggagcccaccctct
tcacggtcctcatcacctacaacaatgtcagagctcaacaatgggaatcatagtggtcct
gccactcccattcagactgttgccgccacctctgcagattcgcctatgtccactttctca
ggactgtccgttaaggcagggattactggactctccagcccgtcctcgtcctttggcgat
gaccaggatgaagatatccctgttgacgccatcacaccgaccctgactggtgcaccactt
ccttcttataaccaggaccagtcaaagccatcattccaacaggcaaagtttgccttgctt
taccagctggatgataatcctgacagaagaaatttcctggacaagtatgcctcgtttatg
gaaagttcaggggccccagtaactcatgttcctgttatcaacaatgagcccctagacctg
tttaaattctaccgagctgttagagagagtggaggccttcaagagatcgtgaagaagaaa
tcttgggactctgtaatttttaacatgggagcacctcttcagctttccaacattcttcgc
actcagtatgctaggctactcttatcctatgagatgaaagacagtcaaggggggaatgtc
gatgggattctaaaaaatgatctagaagattccgggatacctccaccaaacgctatggtg
acctgcactgaagccatcatcccgtcagcatcagtaacaacctctatccctggtgattcc
tataattctgggtacaaccacatgaacgggccacagggatacaatggtcctcagacgtat
gagggccatcaagagggctatgaaggcagtaaggggttcatgaacgataccatggacccc
agacatactgcccctccgcagttaccaaacatgggtggctataacatgcctccttacaac
atgatgggcaacgagaggagtagctatcctgggtaccccagccagagcttccaatcagca
cccaacacccagttcacaggagcggcagccttatcacagctggcataccagaggaaccag
caggcaatgcaggggtatcctggtatgcctcctcgacggccatcccacatgggccagcag
gcgccgatgatgtcaagtccaggtccccaagatcccatgacagctgtatggccagggtca
caatacaatgcctcgtctgagcctgtgcagatgtttgactaccttccacctgggcaatct
ggccgcagcatgcgtccatccatgccacagtacccccaagcacccccatacaactcctac
cagagccgacaacagtaccctccaatgccaccctatcgcccaagctcaccccatgtccag
tcctcggcgtcaccttctatgcagcgcccccagatggtgcagtcgcagggtgttcttccg
cagcagttgtcgccaaagcccaagtacaaccagtcacaacagcatagcggccacatgaag
agggaagttggtttcccagcagattgtgtggaaggtactcggcctgtctttaccaagaag
agaaagctaacctccagagacttgggccctgtagaggcgtggcgtgtgatgatgtcactc
aaatccgggttgttggccgagacgacctgggcccttgacacgctgaacattcttctgtac
gacgagaacacggttggttacttcgtactgtcgcacctgcccggcctcctcgataacctg
cttgaccacttccgatgctacctcgcgcagatcttcggcaaaatgtcggacattgaggtc
gggctcggcactgcgttcctgcacaagccgagcaagcgccgagcgaagcccgacgagaag
aagagcccggatgagaagttggaggaggactcgtgcagaagcttaacggcgttcattgct
tccgcttccattgatcacccggatgaggggttcgtcagtagagcccgaatgtggtcacgt
ggcggaagtgacgtcacaacacatatccagacgcacgtagggacagcgacgagcccgcgg
aaagcgttgcatcgtaaagcgcatgcgcgaacagcaatcgcaccggtggaaaaagctgcc
acgcattcacccgaaaacgacgcatgtcagcccgacaagatcacgtgctcgaaagataat
gtcccttgctcgaaggatgatatcacgtgcaataaggatagtatcgcatgttcacgagaa
agggtcgcgtgtttaaacgataatgtcatgtgtttaaaggataacgtaatgtgttcaaaa
gatgccgtcacgtgtcaaaaccgtagcgtcacgtgtccaaaatatagtgtcctgtgccca
gatagcaatgttgagcctaatgaaacgtcggtaaatgacaagtgtaatggggcaaatgat
agctccgacgataacacgtcggctgttcgtaaggtcgacatcaaaacagaggcgttgtcg
gataatatccagtcaataaacgacgtgaaaactaactgcgactccgtggcgagttcgcgg
gagtcgaggacgaagaacgagtgtcagattaagaccgagtcgggcgagaagtgcgagtcc
aaatgttgcgctgaggacacttggaagggtggggtgaaactcgagaactgcgtgtccgag
tcactatcgaaagactgggaattagactccgactcgagctcggaaatggatccggattcc
gacgacgtggacgttagaaacgatgattctcttacggaagaagagaggttcacgaggcgc
ttaaagaaagagctggacttgttgatcgattttgagtcggacggcgacgagacggatgcg
tacatagagtctctggtggcttccaaggtgcgccaggacaggggcgcatgcgtgcacgag
caggaatgcgtgcgcaaagaggacgcgcccttgtgtctgagaactgaatcggacgatgcg
atttctcggcgatgcatctgcgtgtcgaatatattgcgcggtttgtcgtttgttccggga
aatgacatcgagatgcaccggcatgcgggtctgttactcatactcggacgactgctactg
ttataccacgagcacgcgcacagggtgccctataagcggacctacctacaggtggacgag
gagcccgacgtcccggtcgacgatcgggatgattggtggtggcactgcctcgaagtcctg
cgtgagaatgctctcgtcattttgtccaacattgcaggacagctggacctgacgttctac
tcggacacaattcgggcgtccgtactggaaggcttgctgcactggcttgtgtgcgagtct
gcagacgcgcttgaccccatgccgacggccacacccagtacctccttatcggcccaacag
ctggtcctggaagccctggccaagatgagcatcttgggcggtaacgcagagctaatcatc
tccacctcctcctccccgcagctcgtgctcatccacgatacactagtgcggttactcggc
tcgcgcggtaaccctgtgtgccgtgagctcaccctagtcctgctctccaacctctcgcag
agcgataacgagttcgccaacctcggcgataagaagcagtgcatcgccatgcttttgcag
ttcatcgaagacgcggcgaactccattaacgcgtactcgagtgggtcttctcttgcccag
ggcgggtatacttctgaggacttttgcggcacaagcgtggacatgctgcggcgcgcggcg
tccactctcgtctgtctatcgcgctgtaaatccaacaaggcagttttcctgccgttccag
gatcgccttctagttctcaccactctgcgactactggatggaatgatcgggagccatttg
gcggacgttctgtattatttatcgagatga
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integrated database retrieval system
