Nematostella vectensis (starlet sea anemone): 5501878
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Entry
5501878 CDS
T01037
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
5501878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nve04131
]
5501878
Membrane trafficking [BR:
nve04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
5501878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_VPS8_2
Clathrin
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_5
zf_RING_Vps8
Beta-prop_NWD2_C
zf-RING_2
Beta-prop_HPS5
zf-rbx1
zf-RING_11
Beta-prop_DCAF4
zf_RING_Vps8_fungal
TPR_PEP5_VPS11
EIF3I
WD40_Prp19
Beta-prop_IFT140_1st
WDR55
Beta-prop_EML
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
5501878
NCBI-ProteinID:
XP_032226078
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MADASIADETALAGLLSAAEDLESLSSLDAAFTTDSTRGNAGSFRAQPLIDTADIESDLP
VVDDIPTLESILNEKDDDAMSLESDPELASILHGEALSSPINLDLSSDKKTKHNKHGPIL
RQIILKNVSAQMASAASKVDAGLPTAMAVSSVIAIGTSHGVILIFDPQQTLKLVLGNTVT
GSEYGAVTALGINKDCTRLLCGHARGQICMWDLQSGKLLRTILDAHPIGSAVLHVRFTDD
PTVAFCSDSGGSVFVLSFKRLIGVRSYESTCLFSGSRGEVCTLAPLHMHQGMKDHPMYEF
SMLALATLTKVLRAYAFFLPCYKWAVCFILILFIIVIFQICMWDLQSGKLLRTILDAHPI
GSAVLHVRFTDDPTVAFCSYSGGSVFVLSFKRLIGVRSYESTCLFSGSRGEVCTLAPLHM
HQGMKDHPMYEFSMLALATLTKVLVLTLKPTMEVLFTHRLQGPSDSLPLLSWQFAIIQVA
SHKVIDPVLAFGRGGCIYFYQAHCRSEKDVKFMFLQRVEVDYKLIALNWLNPHVMAAIDS
LERLHVLDVRSMEELEIVDLSSVQLVYSSSYFKSLSTGGNVSKALVAASEHACYQTIAVF
NGQMLVLGRKAIHVLTMRTWTDRLSLLVRLNRFTEALDLALSFYNGTAKAVVGLVGSIES
RRYQVATEMEELLVAYADIVVFNNCPKSGERTLQIKYFEDTVPVFIHYTLAIQKTDLLFR
DIYYKFCEDSIGKTVFLECLQPYILSDRLTSLSPIVMKDFIEHYQEMGRLKEVEACLLHL
DVMNLDIHQMVKLCWSHCLYDAILYVYNRGMRDYTTPLEELLAVLKSSINSDKPLNDTDQ
ALGYRLLVYISCCLAGRAYPVGEIQQDIVTQVKSQVFNCVTAANTRDAFETESPYPYVRT
LLQFNTQEFLNVLSMAFEENEFDQDFRRPSGVAGRQYVVNILLEVMVQGTGFSPKQVGSL
FTFLARQLAKHDSFQVDKILFEQVLEYLANPDDDSRHEERQQALLELLAAGGLNHFDDER
ILVLAENAKFYRVCELLYEKTRQFPKILSCYLRDPARREQAFLYIHTAMTDDAYTDLERE
EVKAAALDALQELVSVSCTMSANLIIFDFPDTLVTVVARLTLIHQSQTNPSVQYEFLKGV
FDGRTLMSKPEFSPDANIHERYIELMCNYETDEIVYNYLRTADNYRIEETLSMVRGRGLT
YATAYLLEKAGDVQGAFQLLLEKLKEKVMKNVEAFEKSRSFNEVRICSTELWSVMVVITQ
LCQRNSARMDESDREALWFPLLETVMAPQRKWKDTSSEEFKAFKDLTRHVMNGMMGYIAL
PAILQKIMQDPTYSTRKFGEIKELILGMLNTYNYESTLLKTTNQLLAKDLHSSMSALRSN
RNRGLAPVSTVCGMCHHSSSSDARKTGKVAILRCGHMFHTECLTGTSDVTTTVICPFCQH
SNQSSRKSAPSRFNRHGGASGDMGSRPDKSQGLSSQQFENISRFRRLNKTPSRLAILSEL
SRSRDDGAITLNYGSRSRSSRSIFQDENFKLQLAPPPIPKER
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccagcattgcggatgagaccgctctagccggtttgctctctgctgcggag
gatcttgagtccttaagttcactggatgcggcgtttacgactgatagcacaagaggaaac
gcgggctcctttcgagcgcaacctctcatcgacacggctgatattgagagtgatctgcca
gtggttgatgatattccaacactagagagcatactcaacgagaaagatgacgatgccatg
agcctcgagagcgacccagagcttgcgtccatcctccacggggaagcgctctcctctccc
atcaacttagatttaagcagtgacaagaagacgaagcacaataagcacggccccatcctt
agacaaatcatcctgaagaatgtctctgctcaaatggcttctgctgcttccaaagttgat
gctggcttgcccacagcaatggctgtatcctctgtaattgcaatcggtacatctcatgga
gtgatcctaatatttgacccccagcagacattaaaacttgttctcggaaatacagtaact
ggttctgaatatggtgctgtgacggctcttgggataaacaaagattgcactaggctactt
tgtggacacgcaagggggcagatatgtatgtgggatcttcagtctggcaagttgctaagg
actatcttagatgcacatcctattggctctgctgttcttcatgttaggttcacagatgac
ccaactgttgccttctgtagtgacagtggcggatctgtgtttgtgcttagcttcaagagg
ttgattggcgtcaggagctacgaatcaacatgtcttttctctggaagccgaggagaagtc
tgcactcttgctcccttgcatatgcatcaaggaatgaaggaccaccctatgtacgagttc
tccatgctggccctcgcaactctcacaaaggttctaagagcttacgccttcttcttgcca
tgctacaaatgggcagtttgttttattctaatcttgtttattattgtaatttttcagata
tgtatgtgggatcttcagtctggcaagttgctaaggactatcttagatgcacatcctatt
ggctctgctgttcttcatgttaggttcacagatgacccaactgttgccttctgtagttac
agtggcggatctgtgtttgtgcttagcttcaagaggttgattggcgtcaggagctatgaa
tcaacatgtcttttttctggaagccgaggagaagtctgcactcttgctcccttgcatatg
catcaaggaatgaaggaccaccctatgtacgagttctccatgctggccctcgcaactctc
acaaaggttcttgttttgactcttaaaccaacaatggaggtgttattcacacatcgctta
cagggtccatcagactccctgcctctcctctcctggcaattcgccatcatccaggtggcc
tctcataaagtcattgacccggtgctggcatttggcagagggggttgtatttacttttat
caggctcattgccgtagtgaaaaagatgtcaagttcatgttccttcagagggtagaggtg
gactacaaactgattgctctaaattggctcaacccgcatgtgatggctgccatagactct
ctagaaaggcttcatgtattggacgttcgatcaatggaagaacttgagatagtagattta
agcagtgtccagttggtatacagcagcagctatttcaagtcattgtcaactggtggaaat
gttagcaaagctttggtggctgctagtgagcatgcttgttaccagacaatagctgtgttc
aatggacagatgcttgtacttggaagaaaggcaattcatgtgctcaccatgcgaacctgg
acagataggctttcattgcttgtccgacttaatcgattcactgaagcattagacttggct
ttgtcattctataatggaactgccaaagctgttgtcggtttggttggaagtatagaatcc
agaaggtatcaagttgctactgaaatggaagaacttctggttgcatatgctgatattgtt
gtatttaacaattgccctaaatcaggggaaagaacactgcaaataaagtactttgaggac
actgtcccagtcttcattcattacaccttggctattcaaaaaacggacttgttatttcgg
gatatctactataaattctgtgaggattcaattgggaagacagttttcctggaatgtttg
cagccctacattctctctgacagactgacatcactgagtcctatagtgatgaaggatttt
atagagcattaccaagaaatgggaagactcaaggaagtagaagcttgcctccttcatcta
gatgtgatgaacctggacatacatcagatggtgaagttgtgctggtcacattgcttgtac
gatgctatcttgtatgtctataaccgcggcatgagggactacaccacgcctttagaggaa
ctcctggcagtgctcaaaagctcaatcaactcagacaagcctctgaatgacactgaccag
gctcttggatacagactcttggtgtacatcagttgctgtctggccggcagagcctatcct
gttggggaaattcaacaagatatagtaacacaagtgaagtcacaggtttttaactgtgtg
acagctgccaacacacgcgatgcttttgaaactgaaagcccctacccctatgtgcgcacg
ctgctccagtttaatactcaagagtttctgaacgtcctttccatggcatttgaggaaaat
gaatttgaccaagacttcaggcgaccaagtggagtggcaggacgtcagtacgtagtgaac
attcttctagaagtaatggttcagggaactggcttttcgcccaagcaagtggggagcttg
ttcacattccttgcacgtcagttggcgaagcatgattctttccaagtagacaaaatactt
tttgaacaggttcttgagtatctggctaatccagatgatgactcacgtcatgaagagaga
cagcaggcattgctggaacttcttgctgctggtggtcttaaccatttcgatgatgagcgg
atccttgtcttggctgagaatgcaaaattctatcgtgtgtgtgagttgctgtatgaaaag
acaagacaattccccaagatcttgtcatgttacttgagggatccagctcgcagggaacaa
gcgtttttgtatatccatacagcaatgacagatgatgcctacactgatctggagcgagaa
gaagtcaaagcagctgctcttgatgctttacaggaattggtcagtgttagctgcactatg
tctgccaacctcatcatcttcgacttcccagataccctagtgaccgtggtggcacgcctc
acactaatccatcagtctcagaccaatccatccgtgcaatatgaatttctcaagggagtg
tttgatggcagaaccctgatgtctaagccagagttttcaccagatgcaaacatccatgag
cggtacattgagctgatgtgtaactacgagactgatgagatagtatacaactatttgcgc
acggcagacaactatcgtatagaagaaacattgtcgatggtccgtgggcgcggtctgacg
tatgctactgcttatctgctggagaaagcgggagacgtgcagggggccttccagttactg
ctagagaaactcaaggaaaaggtgatgaaaaatgttgaagctttcgaaaaaagccgaagt
tttaatgaagtgcgcatatgtagcacagaactgtggtctgtgatggttgtgatcactcag
ttgtgtcagaggaactcagcgcgaatggacgagtcggatcgagaggcactgtggtttccg
ctgctcgagactgtcatggcccctcagaggaagtggaaagacacatccagcgaggagttc
aaagcattcaaagatcttacacggcatgtcatgaatggcatgatgggatacatagccctc
ccagcaatcctccagaagataatgcaggaccctacgtatagcacaaggaagtttggtgaa
attaaggagctcattctggggatgttaaatacctacaactatgagtcgacattgttgaaa
accaccaatcaacttctagccaaggatctgcactcgtctatgagcgcccttagatccaat
cgtaaccgaggccttgccccagtctccactgtgtgcggcatgtgtcaccacagctccagc
agcgatgccaggaagacaggaaaagtagccatactaaggtgtggccatatgttccacact
gaatgtctaaccggaacaagtgatgtcaccacgacagtgatctgtccattttgtcaacat
agcaaccagtctagtaggaagagtgcaccttcaagattcaacagacacggtggtgctagt
ggtgatatggggtcaaggcctgacaaatctcaaggtctctcaagtcagcagttcgagaac
atctcacgcttcaggagactcaacaaaacgccttctcggctggcaattctgtctgagctc
tctcgatcaagagacgatggtgccataactttgaactatggatcaagatcacgatcttct
cgcagtattttccaggatgagaacttcaagttacagttggctcctcccccaatacctaaa
gaaagatag
DBGET
integrated database retrieval system
