Nematostella vectensis (starlet sea anemone): 5501970
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Entry
5501970 CDS
T01037
Name
(RefSeq) laminin-like protein epi-1
KO
K05635
laminin, gamma 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04512
ECM-receptor interaction
nve04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
5501970
04518 Integrin signaling
5501970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_LMN_ATRN
Laminin_N
Laminin_B
LAMININ_IV_B
Motif
Other DBs
NCBI-GeneID:
5501970
NCBI-ProteinID:
XP_032226137
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MASSWSWSILLFYLWTFRYASGQDGCSSGDCFPRNTEITGFYNATTNSTCGTPREEYCIA
QSGSDCSKVCDASNPNTSHPVSHVNDAFDLKTFWKSRNVDQPVFIDFNFGAVYIFMQAML
LFEYELPAAMYLSKSKDFGSSYDVIGFYSSDCQAYYNMTETQYNRRNASLTECFKINPLS
SDQRVNHMPMQDTVIAAKIRVDHNVQLKFLMTNFRVVLDKYVTPPGYDPPTSSDTLKKSF
YFSIQNIDILAACFCNGQADTCDTKDPSVCVCEKNTAGNNCEKCLPLFNNKPYAPQRACE
DCGCNNHSASCEYHSSKGYGVCLNCTDNTMGDKCEQCKPEFYRNPDTPLNHTNTCLDCAC
TLTGVRNMPNNTECNAVTGECDCKPNVQGRACDTCKDTMWNISNTSPQGCQECGCHGAGT
VNASDVCRKLDGQCPCKQAVTGRTCDTCKDGFYSLNAGNTAGCSACNCDPAGSINVTCSD
GGACHCRPHFSGLKCDVIERGFYKASVEELVFEAEKGVIAPAQDQIIRHSMSPDSSGNNR
LFVAVELVEGNNVTEPSRVAMTVSIPKTTFYDVALRYQTKTNWQLIKMTLSLRSLFSSFS
CDGGVTMVTNNTPTTLLSNLPSGAEAAVFDRGACLREGVYAVEVVLSPGSAGANKATAKL
ALDSVVIFPSITRYAEYTRASPALQQNMSYYHGLVPDYRNWTGHKEIGCQVLAGFYGDLY
QKGQACECNATGAVTPSVCDQCGGQCSCRPHVIGRKCDECRPDYYDFTSGLGCKACACNM
TGSKRSSCHPDTGKCECHPSITERQCSRCLDHYFNFTSGVGCQPCGCNELYSRDLQCDND
TGVCSCKDGVGGAKCTECSDAFYNLTTEGCTGCQCDLNGSLNPVCNKLNGNCTCRSNAIG
RLCDSCPDGSYGLRAGHPDGCLRCHCSGFSTNCSMASGYTRGQLISYLLLTADPTDLDGW
TGRYPNGQLASNLIFSSISNLPGGFYRFYIEASSARDFYFSAPTKYLTRGRYAYTHAMTF
SLQQDNTTIPSSSTRGDVIIKGRYFNSELVTSLPTPPGLTFTTYKVVFLESNWRIGNTSG
RVATDKELVRVLSSLEYLWIRGRWTNLTDPSLKTRLMDITMTIANKSSIGDTVFNVETCQ
CPIQYVGQFCERCAPGYTRATPNGGAYTPCVPCSCNNHTDTCDPESGVCIDCQHNTTGDH
CEKCAVGLYGDATNGTSSDCRECPCPGGPFSANSFARSCVLGSDGLPTCTNCSESHAGRQ
CERCQDGYYGTPTDPVNGQCRKCNCNGNVDPGVTGNCNTTTGECLKCLYNTSGFNCQWCV
SGFHGNATAKTCQACNCTDRGSKHGECNNVTGQCDCHPLVTGLSCERCVKDAFNYTSGKG
CTACGCHPQGSNDTQCDAVFGNCTCNTNVKGDKCDQCMPNFYDVGKSCIGKSRNAISVTL
LWMCHAILHNLYTRQRVTPIT
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagttggagttggagtattttactcttttacttgtggacttttagatatgct
tcaggccaagatggctgttcttcgggagattgtttccctcgcaatactgagattactgga
ttttataacgcaaccacgaactctacttgtggaactccaagagaggaatactgcatcgca
caaagtggttcggactgctccaaagtttgcgatgcaagtaaccctaacacgagtcaccca
gttagccacgtgaacgatgctttcgatctaaaaacattttggaaatctagaaatgtggac
caaccagtttttatcgattttaatttcggcgcagtttatatattcatgcaagcaatgttg
ttgttcgaatacgagctcccggcagctatgtacctatcgaagtcgaaggattttggttcc
tcgtacgatgttattgggttctattcttcggattgccaggcatattataatatgacggag
acccagtataacagaaggaatgcttcgctaaccgaatgtttcaagataaaccccctcagt
agcgaccaacgggtaaatcacatgcctatgcaggatacagtgattgcagctaaaatccgt
gtcgatcataatgttcaactaaagtttctaatgaccaactttcgtgttgtcctggacaag
tatgtgaccccaccgggctatgatcctcccaccagcagtgacaccttgaagaagtcattc
tacttctccatacagaacattgatatcctggcagcttgcttctgtaatggacaagcagat
acttgtgacaccaaggacccttctgtttgtgtctgtgaaaagaatactgctggaaataat
tgtgagaaatgcttgccactgttcaacaacaagccatatgcacctcaaagggcatgtgaa
gattgtggatgtaataaccattcagccagctgtgaataccactccagtaaagggtatggt
gtgtgcctgaactgcacagataacaccatgggggataagtgtgagcagtgcaagccagag
ttctacagaaacccagacaccccactgaaccacaccaatacttgcttagattgtgcgtgt
accctgactggagtacggaacatgcccaacaacacggaatgtaatgctgtgaccggagag
tgcgactgcaagccaaatgtccagggccgggcgtgcgacacatgtaaagacaccatgtgg
aacattagtaacacaagtcctcagggttgccaagaatgtggttgtcatggtgctggcact
gtgaacgcctctgacgtgtgtcgcaagctggacgggcagtgtccgtgtaaacaagctgtg
acggggaggacttgtgacacttgcaaggacggcttctacagcctgaacgcaggcaacacc
gctggctgcagtgcatgtaattgtgaccccgcgggctcaatcaatgtcacgtgttccgac
ggtggagcttgccactgtcggcctcacttttctggtttgaagtgtgacgtcattgaaagg
ggattttacaaagcaagtgtagaggagttggtgtttgaagcagagaaaggcgttatcgct
cctgctcaggaccagatcataaggcattccatgtcgcctgacagcagtggaaacaaccgc
ttgtttgttgccgtcgagcttgtggaaggcaacaatgtgacggagccgagccgtgtggcc
atgacagtctcaataccaaagacaaccttctacgatgtcgcgcttagatatcagacaaaa
acaaattggcaattgatcaagatgaccctgagccttcgctcgctgttcagcagtttctcc
tgtgatggcggcgtcaccatggttaccaataatacccctaccactcttctatcaaacttg
ccatctggtgcggaggctgccgtgttcgacagaggggcgtgtctgagagaaggggtgtat
gcagtagaggttgtcctatcgcctggttctgctggcgcaaacaaagctactgctaaactc
gccctggactcggttgttatctttccgtccatcacccgatacgcggagtacacccgcgca
agccccgcactacagcaaaatatgtcctactatcacggacttgttccggactatagaaac
tggaccggacacaaagagatcggttgccaagtgttggccggtttctatggcgacctttac
cagaaagggcaggcatgcgagtgtaacgcaacaggtgccgtcacgccatctgtgtgtgac
cagtgtggagggcagtgtagctgcaggcctcatgtgattggtcgtaaatgtgacgagtgc
agacctgattactatgacttcacttccggtcttgggtgcaaagcgtgcgcatgtaacatg
accggatccaagcgcagctcctgtcatccggacaccggaaagtgcgagtgtcacccgtca
atcaccgaacgccagtgctcgcgctgccttgaccattacttcaacttcacaagtggtgtt
ggttgtcagccgtgcgggtgtaatgagttgtactcgcgtgaccttcagtgtgataatgac
accggggtgtgctcgtgcaaggatggtgtgggcggggccaagtgtacggagtgtagtgac
gccttttataatctcaccactgaaggctgtaccggctgccagtgtgacttaaacggtagc
ctcaatccagtctgcaacaagctgaacggtaactgcacgtgtcgctctaatgccattggc
cggttatgtgatagttgtccggatggatcgtatggacttagggccggacatccggacggt
tgcttgcgttgccattgttccggattctccactaattgttctatggctagcggttacaca
cgtgggcaattgatctcctatttgcttctgactgctgacccgaccgatttggacgggtgg
accggacgctatccgaatggacagttggccagtaatttaattttttcttcgatctcgaat
ctcccaggaggcttttatagattttacattgaagcaagttcggctcgcgacttctacttt
tctgcgcccacaaaatacctgacccgcggtcgatatgcttacacgcatgccatgaccttc
tcactgcaacaagacaacactacgatcccgtcatcctccacgagaggtgacgtcatcatc
aaggggcggtacttcaacagcgagctggtgacttcccttcccaccccccctgggttaacg
tttaccacttataaggttgtgttcctggagtctaactggagaattggcaacacctctggc
cgagtcgcgactgacaaagagctcgttcgcgtcctcagcagcttggaatacctgtggatc
agaggaagatggaccaaccttactgacccctcccttaaaactcgcctgatggacatcacc
atgactatagccaataagagctcgataggagacaccgtgtttaacgtggagacttgccag
tgtcccatacagtacgtggggcagttctgcgagaggtgtgcccccgggtacacccgtgcc
acgcccaatgggggcgcatacaccccttgcgtcccgtgcagctgtaataaccacacagac
acatgtgaccccgagtctggtgtgtgcatcgactgtcagcacaacaccacaggtgaccat
tgtgagaagtgcgcagtcggtctctatggcgacgccaccaatggaacatccagcgactgc
cgagagtgcccctgcccgggtggtcccttctccgccaactcgttcgctcgctcgtgcgtg
ctggggtccgatgggctaccgacctgtaccaactgcagcgagagccacgcggggcggcag
tgcgagagatgccaggatggttactatggtacccctacggaccctgtcaacggccaatgc
cggaagtgcaactgtaacggtaacgtggaccctggcgtgacaggcaactgtaacacaacg
actggcgagtgccttaagtgcctatacaacacttccgggttcaactgccagtggtgcgtc
tcgggtttccatggcaacgctacagcgaagacgtgccaagcttgtaactgtaccgatcgg
ggctctaaacatggcgagtgtaataacgtgacgggacagtgtgactgccatccgctcgtc
acgggcctgtcgtgtgaacggtgcgtgaaagacgcgtttaactacacaagcgggaaaggg
tgtacggcgtgcggctgccatccacagggatccaacgatacgcagtgcgacgccgttttt
ggcaactgcacgtgcaacactaacgtgaaaggtgacaagtgcgaccagtgcatgcctaac
ttctacgacgtgggcaaaagctgtataggtaagtcacgcaatgcaatatccgtcacgcta
ttatggatgtgtcacgcaatcttgcataatttatacacgcgtcagcgtgtcacgcctatc
acatga
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