Nematostella vectensis (starlet sea anemone): 5502423
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Entry
5502423 CDS
T01037
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5502423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nve03041
]
5502423
Spliceosome [BR:
nve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
5502423
Complex C
U4/U6.U5 tri-SnRNP related factors
5502423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
5502423
NCBI-ProteinID:
XP_001623607
UniProt:
A7SXQ7
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MANRTVADAKNIKGTNPQYLVEKIIRTRIYESKYWKEQCFALTAELLVDKAMELDHIGGT
FGGNIKPTPFLCLLLKMLQIQPEKEIIVEFIKNDDYKYVRALGAMYMRLVGTALDCYNYL
EPLFNDYRKLKRMSQTGVYEVVHMDEFIDDLLREDRVNDIILPRIQARHILEATNTLEPR
RSLLEDDLEDMESEEEEEEEEHKESPVHHRSLSPEPRRGYRDQRRRSHSPAHHRRSRSRS
RSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTHRRHRSRSHS
PEKKKHKKKEKKEKDEKRKSRAEDEGLTKEQLEIKEANELRASLGLKPLK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgaacagttgcggacgccaaaaacattaagggaacaaatccgcaatatctc
gtcgagaaaatcatcagaacaagaatatatgagagcaaatactggaaggaacaatgtttt
gcccttacagctgaattgcttgttgacaaagctatggagctcgatcacataggtggaaca
tttggaggcaacatcaagccaactcctttcctttgtttgctgctaaaaatgctacagatt
cagccagaaaaagagattatagtggagttcatcaaaaatgatgattacaagtatgtgcgt
gctcttggggcaatgtacatgagactggtggggacagcccttgattgctacaactacttg
gagcctttatttaacgactacagaaaactgaagaggatgagccaaacaggagtctatgaa
gtggtccacatggatgaattcatagatgatttgctgagggaggacagagttaatgacata
attttacccagaatacaggcaagacatattctggaagcaacaaataccctcgaaccaagg
agaagtctgttagaagatgatttggaggacatggagtcagaggaggaagaggaggaagaa
gaacacaaggaatctcctgtccaccaccgtagcctctcaccagagccgagacgtgggtac
cgcgaccaacgccggagaagccactcccctgctcaccacagacgaagtcgatcacgatcg
cgtagccgctctcccagaagaagacgaagaagccgtagtccccgaagacgccgccgctct
cgctcgccttcgccacatcatcgcagccaccgaagtcgtagtcggtcacgttcgccgcgc
cgtcggcactctcgatcacgttcgcctactcatcggcggcaccgatcgcgatctcattcg
cccgaaaagaaaaagcacaagaagaaggagaagaaagagaaagacgagaagaggaaaagc
cgagccgaggacgagggcttgactaaagaacagctcgaaattaaagaagcgaacgaactt
agagcctctttggggctcaagccgttaaaatag
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