Nematostella vectensis (starlet sea anemone): 5503325
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Entry
5503325 CDS
T01037
Name
(RefSeq) location of vulva defective 1
KO
K04988
polycystin 1L2
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5503325
04091 Lectins [BR:
nve04091
]
5503325
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5503325
Lectins [BR:
nve04091
]
C-Type lectins
Others
5503325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD_channel
Polycystin_dom
PKD
PKD_4
PLAT
Ion_trans
GPS
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
5503325
NCBI-ProteinID:
XP_032227565
LinkDB
All DBs
Position
Unknown
AA seq
2370 aa
AA seq
DB search
MQFDDHGANPYECDWYFGDGNSLAVSSTQNISTLSHTYTNVGVYNVTVKCINNFGTKISA
AIAIVEIPIVANITFHNLGKFRKIYQLDKLRLQAIISSRSNYMIAFDLGNNVTYRDVKKL
DFNYTDPGVYTIDTEVYNNVSRVNRTFVVTVYKIIPFTTANLTNHPNALAQPTVISFDYN
GALPYECDWKFGDGNSLFVSSDHNISVILYNYARIGRYDVIVVCKNNLGQAKFGTIANVQ
KKISEAAFTDDSPTLITNATTFTIRASHYEFSCFVADIGNGTVGFGKPFCLERFPNVAFQ
DVLGPHTFDHVYLAPGVYLTKLTAWNYLSEIVVAGYVVVQKVYCMYPNARILTFDQSQNS
SITISRRVKKTFETASSIDCKATQTVDYTWTLYLRASGMSSEAVQFLGIRNELVIHPMTL
HYGSYLMRFNVSMRGQHGVYRLDEGYLSVIPSQLVAVIDGGQFIQRGLGTLVTFNASLSY
DPDYPRIRDLDFYWFCYKKTRNVTTDIDALSASSPLQQSPEFNATRFCNESYPDRLVKAG
STIRLETSSLTIYQTYVVILVLSRNLNGTRRRTMTSQEMEIVRGNPPALGIRCVSNCNDK
VSPNLKLSIESVCDEKNIGKVSYYWNLTEVSSGYQQPRPINLDNITLTGSKQRFIAIRPN
SLKGGSTYHLHAYGSVPNRAIGYARAEFTVNVPPSNGICEVDKRVGFVNSTKFTFACKAW
LDEDIPLTYEFSYRASLGLKTTIYVGDKTSVQTKLPVGDPYKNYSIPYFVRIIDAFGAFA
QVSGEVQVFLPPEERDALLVKTYKVFEENTFTRRIKAGNIDEVTKEIDSQISIINVMALE
SGNNGSEHDRARRQKIRTIAVGVLANEIITSLAEVRQIGPSLAYTTAVKKEVSLESQIKA
FDSLVQMESVLQSALEIEQFSSPSDDLRDLGEIGLVVAANIRAASGDSARVYSSPPMKDS
HQDLDATRLEAKELSGNVSAVIDRLSKVLLSLMVPGEQSMSIKTPSMDFTLKRSYPEMIG
NTPIGDTFAGFQLPNASSMFDQETLTALGHVDTEMTNYKENPYTWDSSGETIKSNVISLS
LTDMGNVAINVSELTTPINLFIPRSAPSSENREKSQFVSKKNGSIIYHSVNIDAPSLSIR
IYAGPQATFQVFLKKDRRPSLDKRNLIKNLPDYSSCSSIPPETSDFSDCKEDPYMIFLDE
KLINETGLYYIALRFVFAHAPSSPRVRRDCGGGGRERRSCLSNKEAPYRPPQPLGEGAQL
VPVVPVFDETKDAKYSIQVFQSPCKYWDKEREMWSTMGCKAGPQTRLEVVHCVCTHLTAF
GGGLLVAPNPIDFDKVWAGFKNISDNLSVVVTIAVALAIYIVCAVWARRMDNKDINKDGV
TTITSTNTLHGDHIYELTLNTGSWKGSCTTANVFVNIIGDKGQTGPLSLTDSSKQLFTEG
AANTFVIPLDLSLGQLRYLRVWHDMTGYDSSWFLNFAIIKNLQMDSKWIFMCSRWLALEK
DDGLVDRVLLVSTVAELKNFKTLFNTKVSNDLFDGHLWMSVVKKPPRSPFTRVQRLTCCM
SLLFTTMMTSAMFFNIGGDPDTSTVSLGPLTFSVRQLIIGIQSSFIALPVNILVVQIFRN
LPLLKAPEDGTHKKKASEKRRKTEDSTHEKAVPKKNNKICPEQLPYWFLYVAWALCVTMI
LTSAAITLFYSMMWGKEISNQWLASTLVSFFQDAFLTQPIKVVALAVFVAAILKTLPNDF
SGCTVPSSDISQHQETDMMLGEQADPEVLERARKFKLKEEEMFSIMSSVLLHLVFLGLLL
VVGYTARDPAAYGQTRILKDALQPLPVYDAGSLWEYVETTILPFTFNNVEYNGLRTKEEG
VVADVNLFLIGMPRIRQLRVIKEICKTYLFAEWCADLYSSTKEQKSFYLPGWGTKTNLTY
AECPFPWRYRDTGQLNTLPYWGQLGWYGGGGYTADLGYNTGQADSIIVDLKKNRWLDHLT
RATFIEFTVFNAQVNLFSSVTFLFESQGTGGGIYLLKVETFRLYPHVGPGQTLVILCEIT
VVVVTLILAYKNIKKIYRMKMEYFKQTWNIVQLVVICLTLSAVVLFILRMLDTQKTIKKL
RENPFVFVSFQYATQWAELNTYIVGIVIFLSTLRLLYLISFNRHISMLYNSISRSFSLLA
QFAVEVIIVFTSFAIFTYVVFGSHMDGFGTFQGTLGSLFAMLLGKGYYSDLSQVDVILGP
LLFAVFTTTMMLFMLNIFVAIVMEPYEEAKQAMADEQTDEFDMATFMIDRLKVFIGISRS
AGDPWQARGAQYISHTKQLKNLLNLFDKRLDSFDERVTRLHQLSCEEQREMQDALSMLVG
SEVLKTEQQDGTVLKQQQNDVFVALLMIDC
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcgacgatcacggagcgaatccttatgagtgcgattggtatttcggagacggc
aattcccttgctgtctcatcaacgcagaatatttcgaccctctcccacacctacaccaat
gtcggtgtttacaatgttaccgttaaatgtatcaacaactttggcacaaagatatctgca
gctattgcaatagtagaaattccaatcgtggcgaacatcactttccacaacctcggcaag
tttcgcaagatttatcagttggacaagctccgacttcaagcaattatttccagccgctct
aactatatgattgccttcgatcttggtaacaatgtgacatatcgcgatgtaaagaaactt
gatttcaactacaccgacccaggagtttataccattgacactgaagtttataacaacgtc
agtcgagtgaacagaacttttgtggtgactgtttataagattataccctttacgacagca
aatttgaccaaccacccaaatgctcttgcgcagcccacagtgatttctttcgattacaac
ggtgcactcccatacgaatgtgattggaaatttggtgatggcaattctctatttgtgtct
tcggatcataatatttctgtcatcctatacaactatgccagaattggtaggtacgacgtg
atcgtggtctgcaagaacaacctcggtcaagcgaaattcgggactatcgccaacgtacag
aaaaagatttcagaagctgccttcacagatgactctcctactttgattaccaatgcaaca
acgtttactattagagcatctcattacgagttctcgtgcttcgttgcagacatcggtaat
gggacagtaggctttgggaagcccttttgcctggagagattcccaaatgtggcttttcaa
gacgttctgggtccgcacacattcgatcatgtgtaccttgctccaggcgtttatttaacc
aagctaactgcttggaattatttgtcagagatcgtcgtagcaggctacgttgtagtacaa
aaggtatattgcatgtaccctaacgccagaattctaacatttgaccagtcccaaaacagc
tccataacgataagtcgacgcgtgaagaagacatttgaaacagcttcttcgattgattgc
aaagctacgcaaacagttgattacacatggacactgtacttgcgcgcgtctggtatgtct
tccgaagccgtgcagtttcttggcataaggaatgaattggtaattcaccccatgacctta
cactacggctcttaccttatgcggttcaatgtctccatgcgaggtcaacatggggtttac
cgtctcgatgaaggatacctttcggttattccttctcagcttgttgctgttattgacggt
ggtcagtttatccagcgggggcttggtaccttggtgacatttaatgcatccttatcttac
gatcctgactaccctcggatcagggatttagatttttactggttttgctacaagaaaacc
cgtaatgttacgacagatattgatgcactttctgctagtagccctttgcagcaatcacca
gagtttaatgctacgaggttttgcaatgagtcgtacccggaccgtcttgtgaaggctggc
tcaacaattagacttgagacaagcagtttaacgatatatcagacatacgtggttattcta
gttctttctcgtaatttaaatggtaccaggagacgtactatgacttcgcaagaaatggag
attgttcgtggaaatcctcccgcattgggcatcaggtgtgtaagtaactgcaacgacaag
gtttcaccgaatttgaagctatctatagaaagtgtttgcgatgagaaaaacatcggcaag
gtatcttactactggaatttgacagaagtatcatccggatatcagcaaccgagacctatc
aacctggacaatatcactcttactgggtcaaaacaaaggttcattgcgatcagacctaac
agcttaaaaggtggatctacctatcatctccatgcttatggcagtgttccaaacagagca
attgggtacgctagagctgaattcactgtgaatgtacccccatcaaatggaatatgtgaa
gtggataaacgtgtggggtttgtgaactccacgaagtttaccttcgcgtgtaaagcatgg
ctagatgaggatattcctctgacctacgagttcagttatcgtgccagtttgggactaaag
acaaccatttatgtcggagataagacgtcagttcaaaccaagctccctgtcggggatcct
tataagaactactcgattccgtactttgtcaggataatagatgcttttggcgcctttgca
caagtatcaggcgaagttcaggtgttcctcccgccagaagaaagagatgcacttcttgtt
aagacctacaaagtgtttgaagaaaacacgtttactagacgcattaaagctggcaatata
gacgaagtgacgaaagagatagattcccagatttcaataataaacgtcatggcacttgag
tcgggcaacaacggaagcgagcacgaccgtgcccgcaggcaaaagattcgaacaatagcc
gttggggtattggcgaatgagattataacctccctagcagaagtgaggcagattgggccg
tcccttgcttacacgactgcagtcaagaaagaagtatccttagaaagccagatcaaagcc
ttcgactctctcgtacaaatggaatccgtcctgcagtctgccttagagattgagcagttc
agttcacctagtgatgatcttcgagatctcggagaaatcggactagttgttgcggcaaac
atcagggcagcttcaggagactcggcacgggtctactctagtcctccaatgaaagactcg
caccaggacctcgacgctactcgcttagaggccaaggagctatcgggcaatgtatcagct
gtaatagaccgactgtccaaggttctgttgtcccttatggtgcctggggagcagtcgatg
tcaataaaaactccatccatggatttcacactgaaacgatcctatccagaaatgatcggc
aacacgccgattggcgacacctttgcaggcttccagctcccaaatgcaagctctatgttt
gaccaggagacccttaccgccttaggacacgtcgacaccgagatgacgaattacaaagag
aatccatacacgtgggactcgtcaggcgaaaccatcaaatcaaacgtcataagtctttct
ctaacggacatgggcaacgtcgcgattaacgtttctgaactgacgactccaataaacctg
ttcattccacgatctgcaccctcatctgaaaaccgagaaaaaagtcaattcgtatctaaa
aaaaacggcagtataatatatcactctgtgaatattgacgcgccatcgctgagtatccgt
atctatgctgggccccaagctacctttcaggttttcctcaaaaaagaccggcggccttct
ctggataagagaaatttaattaaaaatctcccagactactcttcttgcagctcaatccca
cccgaaacaagtgacttttcagactgcaaagaggatccctacatgattttccttgatgag
aagctcatcaatgagacagggctttactacattgctttaaggtttgtctttgcgcatgca
ccgagcagtccccgcgtgaggcgggactgtgggggagggggacgggagaggaggtcttgt
ttaagtaacaaggaagctccttacagaccaccacaacctctaggtgaaggggcacagctt
gttcctgtcgtacccgtgtttgacgaaaccaaggatgctaagtactcaatacaagtattc
cagtcgccttgcaaatactgggataaggagcgggagatgtggagtactatgggatgtaag
gctggtccccagacaaggcttgaggtggttcactgtgtatgtactcatctcacggcattt
gggggcggtctcctggtggccccgaatcctatcgactttgacaaggtctgggcaggattc
aaaaacatctcggacaatctgtccgtggtggttaccatcgctgtcgccttggcgatctac
atcgtgtgtgctgtatgggctcgccgcatggataacaaagatatcaataaggacggcgtt
actaccatcaccagtaccaacacattacacggcgatcatatctacgagctgactctaaat
acggggtcatggaaaggctcctgcacgactgccaacgtctttgtcaacatcattggggac
aagggtcagacaggtcctttgtcattgacagattctagcaaacagctgttcacagaagga
gctgccaataccttcgttattccccttgacttaagtctcggccagttgcgttatctccgt
gtctggcacgatatgacagggtatgactcttcttggttcttgaatttcgcaatcatcaaa
aatctgcaaatggattccaagtggattttcatgtgcagtcggtggttggctttagagaag
gacgatggattggtcgatcgtgttcttctagtaagcactgtggcagaactgaagaatttt
aagactttgttcaatactaaggtatccaatgacctttttgatgggcatctatggatgtca
gttgtgaagaaacctccaaggagtccatttacaagagttcagaggttaacgtgttgcatg
tcgttactctttaccacaatgatgacaagtgcgatgttctttaacatcggaggagatcct
gacacttccacggtctctcttggtcccctgacctttagtgttagacagctgatcatcggt
atccagagtagctttatcgcactgcctgtaaacattctcgttgttcaaatattcaggaac
ttgcctctgctcaaggctccagaagatggcactcataagaaaaaagcgtcagagaagagg
agaaagaccgaagatagcacgcacgagaaagctgtgcctaagaaaaataataagatatgt
cccgaacaacttccatattggttcctttacgtagcatgggcattatgcgtcactatgatc
cttacctcagcggccattactctcttctacagcatgatgtgggggaaggagatctctaat
cagtggcttgcttctacgctcgtttctttcttccaagatgctttccttacgcaacccatc
aaggttgttgctcttgcagtctttgttgcggctattctgaaaactttaccgaatgacttt
agtggctgcacggtgccttcttcggacatatcacaacaccaagaaactgatatgatgctt
ggtgaacaggcagacccagaggtgctggaaagggcaaggaagttcaagctaaaggaagaa
gagatgtttagtattatgtccagtgttttgttgcaccttgtctttttggggcttcttctc
gttgttggttacacggcacgtgatccagcagcgtacggacaaactaggattctaaaagat
gctttacagcctcttccggtttatgatgccggtagtctctgggagtatgttgagacgacg
attcttcccttcacatttaataacgtcgagtacaacggactacgtaccaaggaggaagga
gtggtagctgacgtaaatctgttccttattggtatgccaagaatacgtcaactgagggtt
ataaaagaaatttgtaaaacctatcttttcgccgaatggtgtgccgatctctactcatca
acaaaagaacaaaaatcgttctatcttcccggttggggtacaaagaccaatctcacgtac
gctgaatgtccctttccatggcgatacagggataccggacaattaaacaccttaccttac
tggggacagcttggctggtacggagggggtggatatacggctgatttgggttacaacaca
ggacaagctgatagcattattgtagatcttaagaagaatcgatggctggaccatcttacc
cgagctaccttcatcgagttcaccgtattcaatgctcaagtgaatttattcagttctgtt
acgttcctcttcgaaagtcaagggaccggtggtgggatttatctcctcaaagtggaaacc
ttccgactttatccacacgttggaccaggccaaaccctggtcattctctgcgagataacg
gtagtggtagtcacactcatcctcgcatacaaaaacatcaaaaagatctacagaatgaaa
atggagtacttcaagcaaacctggaacatcgtgcagctagttgtgatctgcttaacctta
tcagcggttgtgctttttattttaagaatgcttgacacccaaaagacgatcaagaaactt
cgtgagaatccattcgtttttgtcagcttccaatacgccacccaatgggcagagctgaat
acctacatcgttggcattgttatctttctgtccacgctgcgactactttatctcatcagc
ttcaaccgtcatatttccatgttgtacaatagtatctcacgctcattctcgcttctggcc
caattcgcagtagaagtgatcattgtgtttacttcatttgcgatctttacgtatgtagtg
tttggctcccatatggatggctttgggacgtttcaagggacccttggatcgctctttgct
atgctacttggcaagggctactactcggatctgagtcaagtggatgtaatcctgggaccg
ttactttttgcggtcttcactacgacaatgatgctctttatgctgaacatttttgtggcc
atagtaatggaaccttacgaggaggcaaagcaggcaatggctgatgagcagacggatgag
tttgacatggcgacgtttatgatagacagactcaaagtgtttattggtatatccaggtct
gccggggatccatggcaagcgagaggtgcacaatacatctcacacacaaagcagctgaaa
aacctgttgaacctgttcgacaagcgcttggatagctttgatgaaagggtaacccgacta
caccagctctcttgtgaggagcagcgggagatgcaagacgcgctaagcatgctggtcggc
agtgaagtgctaaaaaccgagcaacaggatggcacggtcttgaagcagcaacagaatgat
gtcttcgttgcgttacttatgatcgattgttag
DBGET
integrated database retrieval system
