Nematostella vectensis (starlet sea anemone): 5503757
Help
Entry
5503757 CDS
T01037
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03030
DNA replication
nve03410
Base excision repair
nve03420
Nucleotide excision repair
nve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
5503757
03410 Base excision repair
5503757
03420 Nucleotide excision repair
5503757
03430 Mismatch repair
5503757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nve03032
]
5503757
03400 DNA repair and recombination proteins [BR:
nve03400
]
5503757
DNA replication proteins [BR:
nve03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
5503757
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
5503757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
Rad17
AAA_5
nSTAND3
PTCB-BRCT
RuvB_N
BRCT_2
AAA_30
AAA_17
AAA_16
AAA_7
AAA_33
AAA_18
RNA_helicase
AAA_14
AAA_2
NTPase_1
AAA_28
AAA_19
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
5503757
NCBI-ProteinID:
XP_032227879
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MDIRSFFSPPDAKKKQNGTAKLASAHGTSKVKRGADDKKEKKQKQCREKKRPKAKRALVI
SESDEEEREFIQKKKKKTTHSNKKPIAVSDSDEEPLPPKIREAAKKNEKAAKSNKKSTYF
DDSDDESPIKQKKSTTKKETPTKKEVHKKQEKTPEKKIVTSAADFFGSEPVHRSANKQLS
GKRKQPSKEEGEEDVCATQDDPVKEEKPSQPSKKRKEEKSPAKKSPAKTALTLASKLSKA
ASAKVLAPETPPPKTPTKSTPSPIKKQVTPKKTTPVKALKEPESKKARTPEKIKQEETIA
TPSSLEKKKSGYRSFMSREGPKALGSKEIPQGAENCFEGLTFVVTGVLDSIERDHAQDLI
QRYGGKVTGSVSKKTSYLLVGRDAGASKLSKAQTLGTKQLDEDAFLDLIRNTPGKKSKHE
QPDTPSKQPKKAKPSKQQSPTASSQDQAGNSQQTASQSSTSSPLTQTPTGSPVVKAEASL
MWVDKYKPSGIKQIIGQQGDKSNMRKLLNWVRNWHKNRTKTLPKSSFFNKDTDGASLKAA
LLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSKKTLEQVVSESLSNKSMDAFVGSNC
ASKGVAAKSGLKHVLLMDEVDGMAGSEDRGGMQELISLIKTSKIPIICMCNDRNSQKIRS
LANYCFDLRFSRPRVEQIKGAMMSIAYKEGIKIPPPAMDQIIQGANQDIRQVLHNMSMWT
ATNKTLTYDQAKQEASNAQKDIKLGPFDAIRKLLSGSDSSKLSLKDKSDLFFCDYSLMPL
FVQENYLMVSPSQASGDLKKTLDLVSRTADSICDGDLVSRQIRSNSSWSLLPMQAMLSAV
IPSYFISGGMGQRIDFPQWLGKNSKQGRLDRILQELQAHMRISTSADKSSINLEYIPHLR
QALTTPLTDQDPPDLKERVASVISLLDAYNLTREDWDSVMEAGLFDGHRDPMDSIPSKTK
SAFTRTYNKEQHKTPYAQKAAPTKSRGKGGGGGGESEFPDEDGADPGPDEDEDDLEVSAM
MVKNKKATAATGKGKTSKDDTGKGKGKGKGRGKKS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggacataaggagttttttcagcccaccagacgctaagaagaagcaaaatggaaccgca
aagttggccagcgcgcacggtacatcgaaagtaaagcgaggggcagacgacaaaaaagaa
aagaaacagaagcaatgcagagagaagaagagaccaaaggcaaaaagggctctcgtaata
tctgaaagtgacgaagaggagcgagagtttattcagaagaagaagaagaaaaccactcat
agtaacaaaaagcctatagctgtgtcagattctgatgaggaacctttgccaccgaaaata
agagaggctgctaagaagaatgaaaaagctgccaaatcaaataagaaatcaacttatttt
gatgattcagatgatgaatctccaattaagcaaaagaagagcacaacaaagaaggaaacc
ccaacaaagaaagaagttcacaagaaacaggagaagacccctgaaaagaagatcgtgaca
tcagctgcagacttctttggctctgagccagtccacagatctgccaacaagcagctctca
gggaaacggaaacagcccagtaaagaggaaggagaggaagatgtatgtgctactcaagat
gatccggtgaaagaggaaaaaccttcccagccaagcaaaaagagaaaagaagaaaaatcc
ccagccaaaaagtctcctgccaaaacagcactaactctggccagtaaattgtccaaggca
gcatcagctaaagtgctagcaccagagacaccgccaccaaaaacaccaaccaagtcaacg
cccagtcctataaagaaacaagtaacgcccaaaaaaacaacaccagtgaaagcattaaaa
gagccagaaagtaagaaagctagaacacccgagaaaattaagcaagaggaaaccattgct
acaccttcttccttggagaagaaaaaatcaggttaccgcagcttcatgtccagagaagga
ccaaaagcccttggctccaaggagataccgcagggagcggagaactgctttgaagggctg
acgtttgtcgtcacaggggtgctggatagcatagagcgtgaccacgcccaggaccttatc
cagagatatgggggcaaggtgacagggtcggttagcaagaaaactagctatctgctggtg
ggacgtgatgctggagctagcaagctttcaaaggcgcaaacattaggaaccaaacagctg
gatgaggatgcctttcttgatctcatacgcaacactcctggaaagaaatcaaagcatgaa
cagccagacacgccatccaagcaaccaaagaaggccaagcctagcaagcagcagtcacct
actgccagtagccaagaccaggcagggaactctcaacagactgcctcacagtcatctact
tcgtcacctcttacacagacacctactgggtcacctgttgttaaagccgaggcgagtcta
atgtgggttgacaagtacaagcctagcggcatcaagcagataatcggccaacagggggac
aagagtaacatgcggaaactcctgaactgggtcagaaactggcacaagaacagaaccaag
acactcccaaaatcatccttctttaacaaggacacagacggggcgtctctcaaggcagca
ctgctatcaggccccccgggcgtgggaaagaccacaactgccactcttgtgtgccaagag
cttggttactcctatgtggagatgaatgctagtgacgccaggagcaaaaagacactggag
caagttgtgtctgagtctcttagcaacaagagcatggatgcctttgttggaagtaattgt
gcctcaaaaggagtggctgctaagtctggcctgaagcatgtactcctcatggacgaagta
gatggaatggcagggagtgaggaccgtggcggaatgcaggagttgatatccctgattaag
accagtaagattcccatcatctgtatgtgcaatgaccgcaacagccagaagattcgcagc
ctcgcaaactactgctttgaccttagattctcacggcctagagttgaacagataaagggt
gccatgatgagtattgcatacaaagaaggtatcaagattccgccgcccgcgatggaccag
attatccaaggcgccaaccaggacatccgacaagtgctacataacatgtccatgtggacc
gccaccaacaagaccctcacttacgaccaggccaagcaggaggctagcaatgcacagaag
gatatcaaactgggtccgtttgacgctatccgaaagctgctttcaggcagtgatagttcc
aagctgagtttaaaagacaagtcggatctcttcttctgtgactactcactgatgccccta
tttgtccaggaaaactacctgatggtcagcccctcacaggccagtggcgacctgaagaag
accttggatctcgtcagccgaacagcagattcgatatgcgatggagacttggtctctcgg
cagattcgctccaacagcagctggtctctgttgcccatgcaagccatgttgtccgctgtc
atcccgtcctattttatcagtgggggcatgggtcaaagaattgattttccgcagtggcta
ggaaagaactcgaagcagggacggctggatagaattctccaagaactgcaggctcacatg
agaatcagcacttcggcagacaagagttcaatcaacttggagtacatcccgcacctcaga
caggctctgaccacgcccctcactgaccaggaccccccggatctgaaggagcgagttgca
agtgtcatatcactgcttgacgcgtataacctgacgcgcgaagactgggactcagtcatg
gaggcggggttatttgatggacacagggaccccatggatagtataccgtctaagacaaaa
tcagcctttacacggacatataacaaagaacaacacaaaactccctacgctcagaaagca
gcgcctacgaaatctcgtggcaaggggggagggggtggcggtgagtctgagttcccggat
gaagacggtgccgacccaggccccgacgaggacgaggatgacctggaagtgagtgcgatg
atggtgaaaaacaaaaaggctacagctgctactgggaaaggaaagaccagtaaagatgat
acgggaaagggcaaaggcaagggaaagggcagagggaagaagtcctaa
DBGET
integrated database retrieval system
