Nematostella vectensis (starlet sea anemone): 5504005
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Entry
5504005 CDS
T01037
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
5504005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nve03400
]
5504005
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
5504005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
DUF4796_N
MUG113
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
5504005
NCBI-ProteinID:
XP_001624938
UniProt:
A7STV9
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MDDNIAGSGFHGVYLLYCVNPKFKGHTYIGYTVNPNRRIKQHNGGVDKGGAYKTSRKKPW
NMILIVHGFPNDIIALQFEWAWQKPTVSRRLKSAATKKKPRERPVQYCFRILSELLRVGP
WNRLPLHIRWLMREYEMEFDPRCLPPFHMTVVYGPLVSRKAKQKAVSSEDQRPDHKEKCI
KCLDVIKIDEKLIRCPKSGCTMTAHMFCLARDFLHCGNEGGLFCLPVDGNCPQCKGSLLW
GDLVKPAESIPSAEDVDEDTDDHWTQGLRL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggacgataacattgcaggaagtggattccatggagtatacttattatattgtgtgaac
ccaaagttcaaaggacatacgtatataggctacacggtgaatccaaatcgaagaattaaa
caacacaatggaggggtagacaagggaggagcctacaaaaccagcagaaagaagccttgg
aatatgattctgattgtacatggctttcctaacgacattatagcattacaatttgaatgg
gcatggcaaaaacccacagtatcacgacgtttgaaatcggcagcaaccaagaaaaagcct
agagaaagacctgtgcaatattgctttaggatcctatcagaactacttagagtagggcca
tggaacagactcccactgcacataagatggttgatgcgagagtatgagatggagtttgac
ccccggtgcctgccacctttccacatgacggttgtgtacggtccacttgtgagcaggaaa
gctaaacaaaaagctgtttcaagtgaagaccaaaggccagaccataaagagaaatgcatc
aaatgccttgatgtgatcaagattgatgaaaagcttattcgatgtcctaaaagtggatgc
actatgactgcacacatgttctgcttggctagagactttcttcactgtggaaatgaaggg
ggcctattttgtctccctgtggatggaaattgcccacagtgcaagggatctttgctctgg
ggggacctagtaaaaccagcagaatctatcccttccgctgaagatgtggatgaggacact
gatgatcactggacacaaggactaagattatga
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