Nematostella vectensis (starlet sea anemone): 5504250
Help
Entry
5504250 CDS
T01037
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
5504250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5504250
03036 Chromosome and associated proteins [BR:
nve03036
]
5504250
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
5504250
Coactivators
SAGA/TFTC/STAGA complex
5504250
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
5504250
STAGA complex
5504250
TFTC complex
5504250
SAGA complex
5504250
SLIK complex
5504250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_HPS5
Beta-prop_IP5PC_F
Ge1_WD40
WD40_like
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
5504250
NCBI-ProteinID:
XP_032228418
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MAANTSASSAPGQQTDPGKKDKQTLLAVLQFLKEKKLLETEKIFRQEANCLGNVELNFET
TPDIDTDLSSVLSAYNSEADPTRYEDYYTSLQAFVEKSLDLYKPELAMILYPLFIHMYLE
LVYKGHENQAQSFFNKFRQSQEDYHEEDIKKLSAMTRREHMGNNDFIATLRSNKFVIRMS
RDTYQILKKHLQELQMETLLSIIQQHLHFDVFEGRPRNKQAVDATSGGITGEATFEANKT
KVLYGLQPEPDLGITIEDDNEEEDDKDKPKKKKPKKENGPGRKKFEFNPNAPPLNRIPFP
EMKDSDKIHKAQILRESAKKLKLSAEVLPSICFYSLLNANEGVNCATISEDAALLSAGFE
DSTIRIWTLTPRKLRMLKPPSELNKIDKEAEDVMERIMDDRTASESRRLVGHSGPVFAVS
IDHDNKFLLSCSEDKTIRLWSLFTFTTLVAYRGHNYPVWDVQFCPRGHYFASTSHDRTAR
LWSTDHQQPLRIFAGHVSDVNKVAFHPNCNYIATGSSDRTVRLWDIQTGSSVRLFTGHKA
AVQSLAFSRNGRHLISSGVDTRLLVWDLAEGTLVAELKGHTDTVYSLCFSRDGTILASAG
LDNCIKLWNTSVFCNQDEDDDDGRHAGLDKSSSCLLGSYSTKKTPIHCLHFTFRNLLLAA
GPFNS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaacacgagcgcttccagcgcgccaggacaacaaaccgaccctggcaagaaa
gacaaacagacattgctggctgttttgcaatttttgaaagagaaaaaactattagaaaca
gagaagattttcagacaagaagccaactgcctcggaaatgttgagctaaacttcgagact
actccggacattgacacagatctgtcgtccgtactttcagcgtacaacagtgaggcagat
ccgacgagatatgaagactactatacaagcctacaagcatttgttgagaagtctcttgat
ttatacaagccggagcttgcaatgatactgtaccccctcttcattcatatgtacttggaa
ttggtttataaaggccatgagaaccaagctcagtcgttctttaacaagttcaggcaaagt
caagaggattatcatgaagaggacatcaagaagttgtctgccatgactagacgagagcac
atgggaaacaatgattttattgctaccctaaggagtaacaaatttgtgataagaatgtca
agagacacttaccaaattttaaagaaacatttacaggagctgcagatggagacgctactc
tcaataattcaacaacacctgcattttgacgtatttgagggaagacccaggaacaagcaa
gcagtagatgcaacctcaggggggatcacaggggaagccacatttgaagctaacaagacc
aaggtattgtatggtttacaacccgaaccagacctggggatcaccattgaagatgacaat
gaggaggaagacgacaaggataaaccaaagaaaaagaagccaaagaaagaaaatggccct
ggaaggaaaaagtttgaattcaatcccaatgctcctcctctcaacagaatcccattccca
gaaatgaaagacagtgacaaaattcacaaggcacaaattctcagagaatcagcaaagaag
ctcaaacttagtgcagaagttctaccatctatatgcttctacagcctgctcaatgccaac
gaaggagtaaattgtgccactatatctgaggatgcagcacttctgagtgcagggtttgaa
gacagtacaatccgcatctggacgcttacaccacgcaaactgcgcatgcttaagccaccc
tcggagctgaacaaaatagacaaggaagcagaggatgtgatggagcggataatggatgac
aggactgctagcgagtcacggcggctggttggtcactctggcccagtgtttgctgttagt
attgaccacgataacaagttcttgttgtcatgctctgaggacaaaaccattcgcctgtgg
agtctgtttaccttcaccaccctggtggcgtacagaggacacaactaccctgtgtgggac
gtccagttctgcccacgtggacactattttgccagcacatcccatgaccggacagcccga
ctttggtccacagaccaccagcagcccctgcggatatttgctggacacgtctctgatgtt
aataaagttgcgtttcatcccaactgcaattacatcgctacgggttcaagtgatcgcaca
gtgcgcctgtgggatatccagactgggagctctgtgcgtctctttaccggacataaggct
gctgttcagtctcttgcgttttctcgtaacggaaggcatctcatttcgtcaggcgtggat
acacgcctgctcgtatgggacctggccgaggggacgcttgtggcagagctaaagggacac
acagacactgtttactcgctgtgtttctcgcgggacggtaccattcttgcgtcagcgggt
ctggataactgcatcaagctgtggaatactagcgtcttctgtaaccaagacgaggatgat
gatgacggtcgacatgcagggttggacaagtcttcgtcgtgcttgctcggctcgtactcc
accaagaagacgcccattcactgcttgcacttcaccttcaggaatctcctactggcagca
gggccattcaattcatga
DBGET
integrated database retrieval system
