Nematostella vectensis (starlet sea anemone): 5504480
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Entry
5504480 CDS
T01037
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nve03009
]
5504480
Ribosome biogenesis [BR:
nve03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
5504480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
MrcB_N
Tom22
Motif
Other DBs
NCBI-GeneID:
5504480
NCBI-ProteinID:
XP_032228676
LinkDB
All DBs
Position
Unknown
AA seq
2804 aa
AA seq
DB search
MVQKKDKNTFKFQRFAERVSNIRLDISHRVEKRTESPDETETFCYESLLKWRELNCTLHF
QQAARELQPLVQTLAQLVHHETQVIEILKKHLQISDSLALEPLLDFLVNLARDLQNDFYP
YFKDFFHILVRLLSVNSQDSALLEQVFSALGYLFKFLWRYMIKDMDNVYSLYSPLLSQQH
KLHIQQFAAESFAFLARKAKDQNKLLDMLFSSLDGQEDLGQGVGFLCFEMIKGVRKQFHS
QTDFLLPIMLSKLGPAQKKVSLELPWNLVHQSLSHTIKLIIKFTSKEHGEIIERCLTSEI
DRLLSLEPLQGVANHLSSALELLEIWISSNTGQLVSHPAAVCQVLLHLLKIPSLLIQASS
SMLKLACCLLISNFPEVVSQRLHKQLIKAIFTSSLPLHQLFSFSKTLLRWDQFSEDVMPL
LLEICQRELLKKSSEVEEVIFLLAEVVLSGLLTEQGGPVSVESKKGFLLFPKAATKAGKV
ITERFLEVLQVKSNSCLALAWGSLVCLPCIRPLDHDLCSKGVLELIRKITTIQFNGETDD
EVANQWMFVLAQAVQTYLLIKPSPGATDLGIEMVSDLLRVSPNNVHLLQMCCCILSHAQA
HGNKHLLSTDNLEKVYPLLSSNLSHPAHLVRLNTLQILSAFEQFQFTPSEDSPNPGQCKL
FEICLDAEQTPPSFHQYRDKLVRLRKLTYSSAYHHALPDFYHDVTARYLLGQLYLNFSPM
WDPVIEVIKTHAQGKNVKIFWEVFRDHLKMAANEAEKYLRHPQPSETAETPSYTAGSADD
LHSLFTSLFSVAVGPREDNRTDHTNFRFLLWKAMAEFPGVVEIRSRDIVPLLLRFIEAEY
MSSDENTAPTQDIRRTEHSSPAEDKGKTEGTLNDIDTGRPVDQDGNNTGRALDQGGNKTG
RPLNQGGNNTGRPLDQGGNNTGRPFDQGDDSVRKNRQQTEASGRRVDKADNTRHRKAATK
SLCAHLNLFGLFHNPRALAKETQVRKIYLSMLTHRDPAVQKLAVACLLTYKFPYMEPYRD
HVNKLLEDESFRDELALFTVDDGMAVVDPAHREELMPIVIRILYGKMQRWTGAGTSGKAG
IGARRAVVLRFLASCPTEEMAVFMDLILAPFKHFSSEVGVSPDSVDLSAVVPLKIQQGYL
TMMGQILHQLGGAVNRFLPHLLHICLVLLYACAHALQHRDQVNPCYISLLKSIRQLAITR
IVDFFEMLPAFDFSTVCEDVLKAAVWPQVESLAQETIQSPTPLLKLFHCWSKNPRYHPLL
SRKPVNCPDTSIMSNVYDCLKAVNVNQSVVTMVMEMTENLLSAEEYVTEGSVTEGGVTEG
GVTEGGVTDLMMFGSELSEIQVPSCAPSPSYSTKLVLPHLSSLLDHLRATVKSLSKSSKK
NSLKRSALPKLELSVLSKISPFVNTAEDSESLIRLLLPFLYMRQREETENNTLRTIQNLL
RNVESPSSFSKTLGRLFSQLNARTSRRSLCEVFQEIAKLEPHFEVIASIVVDMNSWDPKR
IEEPNFEARVGAFSAASRLVLRGTGVEAGEMQEDTVSPPQVLPVDKLLPLLHNCLYFIHR
TDDLSIRDSAVSGLHAIIRRVAARETEFEDVIVNCVLPSVKLALRAKNEAARLEFLGILS
YLCQRFDRPCFTDMRSLCDKDPEADFFENMRHIQLHRRIRALRRLETYCQGRTLTPATLT
SYMLPLVTSYLHDYSAAKDHNILTQAIATVGAIARCLPWSKYSNLLRQYLKVLQRQTEKQ
KTTVRIVVALLNAFHFNLSNLKLDVKPSQTTHEKPREAGGQETKAPDNDADGEEKAEDDR
VADDDNDDDDDGDDDEDANSDVIDEVLAQRIYESLATRILPQLLKTMIKKGQSVHKLSHS
KADDQDSALRVPIALAIVKLLQALPEHTLHLHLPGLLMKVCMTLKSRARDVRDAARDTLC
RIAVTLGTKYLSFVLKEMRTALTRGYQLHVLGFTLHSLLERMTSQLSPGNLDHCLPEITE
VLVEDLFGEISSEREVEKITGKLHEAKASKSQDSFEILAKFVGASSVTLLVTPLKQVLDT
HQSHKISRIVEESFRRIGVGLQANESIDTQTMLVLVHGLTSERLVELTAQDKIEKKEPSP
PPDPRLRSTDTYTIQPEVTRGGKTPEASTRTNAHVVVEFGLQLLHTTLKRGKVSTADQLH
LQMLDPFVSMMTKCLQAKHTKVLTLALRCLCWIVKFPLPSLDKLVPQIAKLLFKLLKKYA
MAGAKIGDNYEMVLSAFKTMTVIIREFKKYTIAQKHLQVLLAFVEEDIHDYTRQGTAFPL
LRAILSRRLMVPEIHDVMAKVAQLSITGATPSIQQQCRQCMAQFMLDYPLGKKLQRNLEF
YVSQLGYEHETGRESALEMLASIFSTFPEKLLFEYSGFFFVPLTTRLVNDDSGKCRKLTA
LTIKTLLQKLDMERRDALFTMVTQWLAGEKVSLRRLAAQVSGLFVEVEGKSFERRLPTVL
PLLSSIIDPANYEKEFEETEEGDESSLKANDHLLFNALTTIAKLVKECNLIRANKRQEEM
TVIWESVESHLTYPHAWVRLVSCRLFGLLFAAWTPQELSFASTSGSKEFLAQESLEKVSQ
LCDDFCVQLDSPFLDNDLGDQVVKNLVFLAKVLHYNMSPETNGTKAGRGTGSGISLETLI
SKMERLATHEASQTPKVTRKRTCVLKWLAALAMALGKDDVRPYLQHVVEPIHRELEIPTT
YKDPALQSLAQEVLSLVKGLVGREAMSEVYASLQHGVMETKEKRKRQRALEAVADPAESA
RRKFKRNLSKKETRKRKLDALKPDRKMKRARSKVEKSESGVLDF
NT seq
8415 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaaaaaggacaaaaatacgtttaaatttcagcgtttcgctgaacgtgtttcg
aacattcgtctggacatttcgcatcgcgtggagaaacgtacagaatcacccgacgaaact
gaaacgttttgttacgaatctcttcttaaatggcgcgaactcaactgtactctgcatttc
cagcaagcagccagggaacttcaaccgctagttcaaacgcttgcgcaactagttcaccat
gaaactcaagtcattgagattttaaagaaacatttgcaaatctcggacagccttgcgttg
gagccattattggattttcttgtgaacttggcaagagacttgcagaatgatttttaccct
tatttcaaggacttctttcatatcttagtgcgtttgttgagtgtgaattctcaggatagt
gccttacttgagcaagtgttctctgctttgggatacctgtttaagtttctatggagatac
atgatcaaagatatggacaatgtttacagtttgtactcacctctcctgagtcaacaacac
aaacttcatatccaacaatttgcagcagagagctttgcctttctggcaagaaaagccaag
gaccaaaacaaactactggacatgttgtttagctctctggacggccaggaagacctggga
caaggcgtcgggtttttgtgctttgagatgatcaaaggtgtcaggaagcagtttcactca
caaactgacttcttacttcccatcatgcttagcaaacttggccctgctcagaaaaaagtt
tcactagagcttccttggaatttggttcatcaaagtttatctcacactatcaagctgatt
atcaagttcactagcaaagagcatggagagatcatcgagagatgcctgacctcagagatt
gacagactgctatcccttgagcctttgcaaggtgtggccaatcacttgagctctgccttg
gagctgctggagatctggatctccagcaatacagggcagctagtgtctcatcctgctgct
gtttgtcaggttttactccatctcttgaagatcccttccctcctgattcaagcctcatca
tccatgctcaagttggcttgctgtcttctcatttcaaatttccctgaagtcgttagccaa
aggctccacaagcaacttatcaaagcaatattcacaagctcactccctttacatcaacta
ttctcattttctaagacactccttagatgggatcagtttagtgaggacgtgatgcccctg
ctgctagaaatctgccagagagagctactcaaaaagtccagtgaggttgaggaagttatc
ttccttttggctgaggtggttttaagtggcttgctgacagagcaaggtggacccgtatcc
gtggaatccaagaaagggtttttactttttccaaaagcagccacaaaagcaggaaaagtg
attactgagaggtttctagaagttcttcaagtgaagtcaaattcatgtctggcattggct
tggggttctctagtctgcttgccttgcatcaggccgctggatcatgacttgtgcagcaag
ggggtgcttgagctgattcgtaagataaccactatccagttcaatggggagaccgatgat
gaggtagcaaaccagtggatgtttgtgttggcccaagctgtccagacctatcttcttatt
aagccttctcctggtgccacagatttgggaattgaaatggtttctgatttactaagagta
tctccaaacaatgtgcacctactccagatgtgttgctgcatactttcgcatgcccaagca
catggtaacaagcacctcctgtcgactgacaacctagagaaggtgtatccgctgctgtcg
tctaacctatcacacccagcacaccttgtacggctcaacaccctacagatcctgagtgcc
tttgagcaatttcagttcactccatcagaagatagcccgaaccctggccaatgtaaactt
tttgagatttgcctggatgcggagcaaacacccccttctttccaccaataccgtgacaag
ctggtacggctgcgcaaactcacctacagctctgcctaccaccacgcccttccagatttc
taccatgatgtcacagcacgttacctgttaggccagttgtacctgaactttagtccgatg
tgggaccctgtcatcgaggttatcaagacccatgcgcaaggaaagaacgtcaagatcttc
tgggaagtgtttcgtgatcatttgaaaatggctgcaaatgaagcagagaaatacctcagg
caccctcaaccctcagagaccgctgaaaccccttcctacactgcgggctcagcagatgat
ctacactccctcttcaccagtctcttttcggtagcagtcgggccacgggaggataaccgt
acagatcacactaacttccggttcctactatggaaggccatggcagagttcccaggagtg
gtggaaatcagatcacgtgacattgtgcctctgctattgaggtttattgaggcggagtac
atgtcctcagatgaaaacacagcccctacacaagacatccgcaggacagaacactcaagc
ccagcagaggacaaagggaaaactgaaggcacattgaatgacattgacacaggaagaccg
gttgatcaggacggcaataacacaggaagagcgctcgatcaaggcggcaataaaacagga
agaccgctcaatcagggcggcaataacacaggaagaccgctcgatcaaggcggcaataac
acaggaagaccatttgatcaaggagatgatagtgtaaggaaaaatcgccagcaaactgag
gcatcagggagaagagttgataaggccgacaacacgagacatcgaaaagcagcaacaaag
tccctgtgtgcccatctgaacttgtttgggttgtttcataatcctagagccctcgctaaa
gagacacaggttcgtaaaatctatttgagcatgctcacacatcgtgaccccgctgtacag
aagcttgcggtcgcctgtctactgacgtacaagtttccatatatggagccataccgagat
catgtgaacaagctgctggaagacgagagtttccgggacgaactggcgctgttcactgtg
gatgacgggatggctgtggtagatccagcccaccgtgaagaactgatgccgattgtgata
agaatcctctacggcaagatgcagcgatggactggtgcagggacttctgggaaagcagga
atcggtgctcgtcgtgctgttgtactgcggtttctcgcgagctgcccaactgaagagatg
gctgtattcatggatttgattctcgccccgttcaagcacttctcttcagaggttggcgtg
tctcctgacagtgttgacctatccgcagtcgtcccgctaaagatacaacaaggctacctc
actatgatggggcagatcctacaccagttgggcggggccgtcaacaggttcctcccccat
ctgttgcacatctgccttgtgctcctctacgcatgcgcacacgcattacagcatagagat
caggttaacccatgttacatctcgctgctgaagtccatacgacagctcgccatcactaga
atcgtggacttctttgagatgctgccggccttcgatttctccacagtgtgcgaggacgta
cttaaggcagctgtatggccacaggttgaaagtcttgcgcaggagaccattcaaagccct
acccctctacttaagcttttccattgctggagcaaaaatccccgataccaccccctactt
tcaaggaaacccgtcaactgtcctgacacgtcaatcatgagtaacgtctacgactgcctg
aaagccgtgaatgtcaatcagtctgttgttaccatggtaatggagatgacagaaaatctc
cttagtgctgaggaatatgtgactgagggtagtgtgacggagggtggtgtgacggagggt
ggcgtgacggagggtggcgtgacggatttgatgatgtttggttctgagctgagtgagatc
caagtccccagttgtgcgccgtctccaagctacagcaccaagctcgtccttcctcacctc
tcctcactcctcgaccatctccgggccaccgtcaagtccctcagcaaatcctccaagaaa
aacagtctcaaaagatccgctctcccgaaactagagctgtccgtcctttcaaagatcagt
cccttcgtgaacaccgctgaagactccgagtctttgatcagacttttgttaccgttcctg
tacatgcggcagcgagaagagacggagaacaatacgctaaggaccatccagaaccttcta
cggaacgtggagagtccgagctcgttttcaaaaacacttggcaggcttttctcccagctc
aacgctagaacctccaggcgatccttgtgcgaggtgttccaagagatcgcaaaattagag
ccgcattttgaggtcattgcttcgatcgtggtggatatgaactcatgggatccaaagcga
atcgaggagccgaacttcgaggctcgtgtaggagccttttcggctgcaagtcgtttggtg
ttgagggggactggtgtggaggctggtgaaatgcaagaggacacggtttctccaccacaa
gtcctcccggttgataagctcctccccttgctacacaactgcctgtacttcattcaccga
acggacgacctatccatccgggacagcgcggtcagcggtcttcatgccatcataaggaga
gtggcggccagggagactgagttcgaggatgtgatcgtcaactgcgttctgccctctgtt
aaactagccctaagagccaagaacgaggctgctcgccttgagttcctgggtattctgtcc
tacctttgtcagcggtttgaccgaccatgcttcacagacatgcgcagtttgtgtgacaag
gacccagaggcagacttcttcgagaatatgcggcatatccagcttcatcgtcgcattaga
gctctgcgccgcttagagacttactgccagggccgtactctcacaccagccaccttaaca
agctacatgttgcccctagttaccagctatctccatgactacagcgctgctaaggaccat
aacattcttacgcaagctatagctacagttggcgccatcgcgaggtgcttgccttggagc
aagtactcaaaccttctaaggcagtacctgaaggttttacagagacagacagagaaacag
aagacaaccgtgcgtattgttgttgcccttctgaacgcgttccatttcaacttgagtaac
ctgaagctagatgtaaaaccaagtcagaccactcacgaaaaaccgcgagaagctggtggg
caagagacaaaagctcctgataatgatgctgatggtgaagagaaggctgaagatgatcgc
gttgctgatgatgataacgacgatgatgatgatggtgatgatgatgaagatgctaatagc
gatgttattgacgaagtgctcgctcagagaatctatgagtccctggccacgcgaatctta
cctcaacttctcaagacgatgataaaaaagggccagtctgttcacaagttaagccatagc
aaggctgacgatcaggacagcgcattaagagtacccatcgctctcgccatcgttaagctg
ttacaagcactgcccgagcacaccttacaccttcatctaccgggtctgctgatgaaggta
tgtatgacgctgaaaagccgcgcgcgggacgtgcgggatgccgcgcgtgacacgctatgt
cggatcgccgtcactctcgggaccaagtacttgtccttcgtgctgaaggagatgaggacg
gcgctgacaagaggatatcagctacacgtgcttggcttcaccttgcactccctgttggag
cggatgacgtcacagctgtcacctggcaacctggaccactgcctgccggaaattactgag
gttctggtagaagacttgtttggcgagatatcaagtgagcgagaagtggaaaagatcaca
ggcaaacttcacgaggcaaaagcgagcaaaagtcaagactcttttgagatccttgccaag
ttcgtgggcgcctcttccgtcacacttctagtcacgccactcaaacaggtactagacacg
caccagagccacaaaatttcccgcattgttgaggagtcgttccgccgtattggtgttgga
ctccaggctaatgagagcatcgatacacagactatgctcgtattggttcacggattgacc
agtgaacgactggtagagctcacagctcaagataaaattgagaagaaagaacccagtccc
cctccagaccctcgcctgaggagtactgatacctacactattcaaccggaagtaacgcgt
ggcgggaaaacgccggaagcaagcacgcgcacaaatgcacacgtggtagttgagtttgga
ttacagttgcttcacactacattgaagcgaggcaaggtttcaaccgctgaccagttacac
ctgcagatgctggacccatttgtttcaatgatgacgaagtgtctccaggccaaacacacc
aaggttctcaccctcgcattgagatgcttatgctggattgtcaaattccccctcccctcc
ctggacaaattagtgccgcagattgctaagctgcttttcaagctcctcaagaagtatgcg
atggcgggagccaagatcggcgacaactacgagatggtgctatcagcattcaagacaatg
accgttataatccgagaattcaaaaaatatacaatcgcccagaagcaccttcaggttctg
ttggcttttgtggaagaggatatacacgattacacgaggcaaggcacagccttcccactt
ctccgggcgatcctcagcagaagactcatggtgcctgaaattcatgacgtcatggcaaaa
gtagcccagctgtcaatcacgggggccacgcctagtatacagcagcaatgtagacagtgc
atggcacagtttatgttggattatcctctcgggaaaaaactgcaacgaaacctggaattt
tacgtttctcaactgggatatgaacacgagacgggacgagagtcagccctcgagatgcta
gcctcgattttctctactttccctgagaaactactgttcgaatactccgggtttttcttt
gtgccgctgaccacacgacttgtgaatgacgattcggggaagtgtcgaaaattgaccgcg
cttacgattaaaacactgctacaaaagctcgacatggagaggcgagatgctttgttcact
atggtaacgcagtggctcgctggagaaaaggtctctttgcgtcgtctggcggctcaggtc
agcggtttgtttgtggaggtggagggcaagagctttgagcgaagattgccgactgtccta
cccctccttagtagcattatcgaccccgccaactacgagaaggagtttgaagagacagag
gagggtgatgaatcgtccctaaaggcaaacgaccatttgctgttcaatgcgctgaccacg
atagccaaacttgtcaaggagtgcaaccttattcgcgccaataagaggcaagaggagatg
actgtgatatgggagtccgtcgagtcccatctcacgtatccccacgcgtgggtgcgcctt
gtctcgtgccgtctgtttggccttctcttcgccgcgtggactccacaggagctttctttc
gcttctacttctgggtcaaaggaatttcttgctcaagaatctctagaaaaggtatcccag
ctgtgtgatgatttctgtgtgcagctcgactcgcctttccttgacaacgaccttggggat
caggtcgtgaagaacctcgtgtttcttgcgaaggttttacactacaacatgtcgcccgaa
actaacgggacaaaagcgggtcgcggaacgggcagcgggatttcgctcgaaacgttgatt
tcaaagatggagcggctagcgacacacgaggcttcgcagacgcccaaggtcacgcgaaag
agaacttgtgtgttgaagtggcttgccgcgctcgcgatggctcttgggaaggatgatgtc
agaccgtacttacaacacgtggttgagcccatccatcgagagctggaaatacctacaaca
tacaaagaccccgctctgcagtctttggcccaggaggtgctgtcgcttgtgaagggcctg
gtggggagagaagctatgtcggaggtgtatgcctcactacaacacggcgtcatggagacc
aaggagaagaggaaacggcagcgggctctagaggccgtagccgacccagcggaaagcgca
aggcgaaaattcaagagaaatttgtcgaagaaggaaacaagaaagcgaaagttagacgct
ctgaagccagacagaaagatgaaacgagctcgaagcaaagtagagaaaagcgaaagtggc
gtgttagatttttag
DBGET
integrated database retrieval system
