Nematostella vectensis (starlet sea anemone): 5504564
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Entry
5504564 CDS
T01037
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
5504564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5504564
Enzymes [BR:
nve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
5504564
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
5504564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF7609
Motif
Other DBs
NCBI-GeneID:
5504564
NCBI-ProteinID:
XP_032228796
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MAPERGDTGQALPSLKNLTLKNYGRLSDTQKQSIQDLVRPHIESFNFMLEEGLPLAAQSI
PPSEFMTANGQKVSLYLTDATIGIPTVSEKNIHTTQMKVFPTECREKGSTYCSKLQVTLQ
WKIDNVPQGSVTKVIAAIPLMVKSNNCSLANLSPKELVRKNEESQEAGGYFIVNGIEKII
RMLILPRRNYPLAIIRPSWKGRGSFYTEYGVQMRSVKGDQSAVNMTLHYLNDGNVMMCIA
YRKELYYVPVVFILKALMNVTDQHIYRELIKAEENNTFWKDCVAMMLRTAQEEGAVNQKS
VLEYIGLRFRVKMRLPDWFSDEAVAQYLIQQCICIHLDTNADKFNLLILMTRKLYALALE
KCCAESADSPMNQEVLLGGHLYLMVLKEKLEMMLQVVGSSLEKASKNKPHDFNVNSASIL
QAVQHAPSISHQMEYFLATGNLISKSGLALQQISGFTVVADRLNYFRFLSHFRCIHRGAF
FSQMRTTSVRKLLPEAWGFLCPVHTPDGAPCGLLNHLAAGCQVVNVVPLVAHMLRLLCTM
GMIPVDAPVPGDYKNYYPVVMDGRVLGSVDRDLAPTLANRLRIMKVLGEERVPQFLEICL
VPITKVASQYPGLFIFSSPARMMRPVLNLAVNKIEMIGSFEQVYMDIAIVQEELHEGVTT
HMELKPTAMLSAIASMTPYSDFNQSPRNMYQCQMGKQTMGTPVHAFQHRTDNKLYRIQTP
QSPLVRPASHDFYIMDEYPLGTNAIVAVISYTGYDMEDAMVLNKASYERGFAHGSIYKAQ
FVNLEPKSQDRTSSSNLQFGTLPDDPRIDGRLDADGFPPLGAHLSTGDPYYSYIDTNTGE
AVVKKYSNLEAGIIDDVKIIGDETGNKTLSKACIKLRIQRNPIIGDKFSSRHGQKGICSQ
KWPVENMPFSESGMTPDIIFNPHGFPSRMTIGMMIESMAGKSAALNGHVYDATPFTFSED
DSAIDYFGKLLVKSGYDYFGTERLYSGIDGREFEADIFMGVVYYQRLRHMVADKFQVRTT
GPIDALTHQPVQGRKRQGGIRFGEMERDALLAHGTSFLLQDRLFNCSDKTMGHVCTQCGS
LLSPLLDKPPVELAAAAAHSERRWYCKPCESSEHIELLAFPYVFRYLVAELAAMNIKTSL
EIKKVGADS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgagcgtggagatacaggtcaagctttgccatctctgaagaatttaacctta
aagaactatggcagactgtcagacacccagaaacagtcgatccaagaccttgtccgtcct
cacattgagtcgtttaactttatgttggaagaaggtttacccttagcagctcagagcata
ccccccagtgaatttatgaccgcaaatggccagaaagtgtccctttatttaactgatgca
accattggaatacccactgtctcagaaaagaacatccacacaacacagatgaaagttttc
cctacagagtgccgagagaagggatcaacctactgttcaaagctacaagtgactttacag
tggaagattgataacgtgccacagggtagtgttaccaaagtcattgcagcaataccactt
atggttaagtcaaataactgctctttggccaatctttcaccaaaagagcttgtcaggaaa
aatgaagaatcacaggaagctggaggatactttattgtcaacggaattgaaaagatcatt
aggatgcttatcttgccaagaaggaactatccattggccattattaggccttcttggaag
ggaagaggctcattttatactgaatatggagtgcaaatgagatcagtcaagggagatcag
agtgctgtgaacatgactcttcattacttgaatgatggcaatgtgatgatgtgtatagcc
tatcggaaggagctttactatgttccggtggtatttatactcaaggcattaatgaatgtg
acggatcaacacatttatagagagcttatcaaagctgaggaaaacaatacattttggaaa
gattgtgtagctatgatgctgcggacggcacaagaggagggtgctgtgaatcagaagagt
gttcttgagtacatcgggttgaggtttagagtgaagatgagacttccagattggttttct
gatgaggcagtggcacagtacctaattcagcagtgtatttgcattcatttagataccaat
gcggacaaattcaatttacttattctgatgacccgcaagttgtatgcactagcccttgag
aaatgctgtgcagaatcagctgacagccccatgaaccaagaggtcctactgggtggccac
ctgtatctgatggttcttaaggaaaaactggagatgatgctccaagttgttggctccagt
cttgaaaaggcatctaaaaacaagcctcatgacttcaatgtcaattcagcctccattcta
caagcggtgcagcatgccccaagtatctctcatcagatggagtactttttggccacaggc
aacttgatatccaagtcaggtctagcattacaacagatatctgggtttactgtggtggcg
gataggctgaattacttccgattcctatctcacttccggtgcatccatagaggagctttc
ttttcccaaatgagaacaacatctgtcaggaagcttttgcctgaggcttgggggtttctg
tgccctgtccacacacccgatggtgcaccctgtggcctgctgaatcatttagctgctggt
tgtcaggttgtgaatgtggtacctctagtagcccacatgctacgactgctatgcaccatg
ggaatgattccagttgatgctccagttcctggtgactataagaattattatcctgtggtg
atggacggccgtgtcctagggagtgtcgacagagatctggcaccaactcttgctaatcgt
ttgaggataatgaaagtcttgggagaggaaagggtgccacaatttctagagatctgtctg
gtccctataacaaaggtcgctagtcagtacccaggactatttatcttcagttcgcctgcc
aggatgatgcgcccagttctcaacctcgcagtcaataaaatagaaatgataggttcattt
gaacaggtttatatggatatagcaatagtacaggaagagttgcatgagggtgtgaccacc
cacatggagttgaaaccaacagccatgcttagtgccattgctagcatgactccatactca
gacttcaaccagagcccgaggaacatgtaccagtgtcagatgggtaagcagactatggga
acgcctgttcatgcctttcaacatcgcacggacaacaaactttataggatacagactcct
cagtccccacttgttcgccctgcctctcatgatttctacatcatggatgaatatcctctg
gggaccaacgccattgtggctgtcatctcttacacgggatatgatatggaggacgcaatg
gttctaaacaaagcatcgtacgaaagggggtttgcccatggctccatctacaaagcacaa
tttgtgaatctggaaccgaaatcccaagatcgtacatcatcttctaacttacagttcgga
acgctaccagatgaccccagaatcgatggtagactagacgcagatggatttccaccgcta
ggtgcccatctctccacgggggacccatattacagttacatcgacactaacaccggagaa
gcagtagtcaagaaatatagtaacctggaagcgggcatcatagatgatgtcaagattatt
ggagatgagactggcaacaagactctcagtaaagcttgcatcaagctacgaatacagagg
aatcccatcattggcgacaagttttccagtcgtcatggacaaaaaggaatatgcagtcaa
aagtggccggtggaaaatatgccattctcggagtccgggatgacacccgacatcatcttc
aacccccacggttttccgtctagaatgacaataggtatgatgatcgagagtatggcgggc
aagtcagctgcactcaacggccacgtgtacgatgccacacccttcaccttttccgaggat
gactcggcaatcgactactttggcaaacttctcgtcaaatctggttatgattattttggc
acggagcgcttgtacagtggtatcgacggtcgtgaattcgaggcagacatctttatgggt
gtggtgtactaccagagactgcggcacatggtggcagacaaattccaggtccgaacaacg
gggcccatagacgcactgacgcatcagcctgtccagggtcgtaagcggcagggaggtatc
cgtttcggagagatggagagagatgcgttactcgctcacggcacttcctttcttctccaa
gatcgccttttcaactgctccgataaaactatgggtcacgtgtgcacacaatgtggtagc
cttctttcgccacttctagacaagcctccagtcgagctggcagcggcggccgcccactct
gagcgccgttggtactgcaagccatgtgagtcgagcgagcacattgaactccttgctttc
ccttacgtgtttcgatacctcgtagccgaactagccgccatgaacattaagacttcgctc
gagataaagaaggtcggagccgacagctaa
DBGET
integrated database retrieval system
