Nematostella vectensis (starlet sea anemone): 5505324
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Entry
5505324 CDS
T01037
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nve04515
]
5505324
Cell adhesion molecules [BR:
nve04515
]
Immunoglobulin superfamily
DSCAM family
5505324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
C2-set_3
Ig_CD22
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
5505324
NCBI-ProteinID:
XP_001626157
UniProt:
A7SQD9
LinkDB
All DBs
Position
Unknown
AA seq
1991 aa
AA seq
DB search
MKATGLVAFFTSVLLWHINFTESKPWILRFADEPADTTFAHTQWAVLTCHVAANPPASVT
WRLARTDTAVTNVTGLRYVMANGSLVFPPFSAERLDPSIHRVDYQCLAKNRFGALISRAA
KLRAVVVRPFRVYAMDSKVTLGNSAVIKTVVPDYAQSYTAVKAWYYDRHVVPLGGRYTIM
PSGDLVITNAHAEDENSMYHWTAVNTLTGETHASNPAKLVVVPSSSPFAPRMTSLVHNLT
LIAGETAVLQCTAAGSPTPYFRWLKSGKSLTMGGRMSVIAGGSLMIESTMASDEANYTCQ
AVNNVGSVHMAIYLEVIVPITFKERPKPQAAQVGFPRKNMECDVTGEPEPKITWYQNAQS
LGQPKGRISIRDNDLVIATVYGQDNGVYQCVADNGRELVQSSAEFYAGFSVPTFNPGTPD
IILYPGTPLQITCEVSAIPYPRDVQWYHDDIPLTGGHDYIITAMPGTKRSSRLSKLSRTA
VSMADSGEYKCVASNAAGSAEQVIKVYVRGPPNITSFRSSVTGVQGDTISLPCRAKGFPP
PVITWSRSGQTIPYDRRQSIDNGTLLIGNVQKSDSGKYTCTAVNTAGERDSVTMTVSIVV
SPRITPFMWAPVDEGQREHYTCVVAEGDMPCNITWLRDGKPLYSIPGDLEIMTSQFISSL
SIPQVMQRHQGVYTCIVGNRAGIARHSAQLIVYVPSKFVTEPRDQQVLREYTAQLSCQTT
GYPPARVEWSKLQGSSFVPLGDNHRFQQLLNGTLVIRNASKRDEGRYSCHAYNGVVGTPV
SRQVSLVVHAVPAVIVSPPSDRSVEVFGEMAFSCVAIGNLPIMLSWFNGSKQMVDSSRVQ
IMRYTKDNAHLVNGTLHVSDLRLWDTKEYSCRVGNQFGRDEKTFKITVQESPSNPSVPRV
SDISSKSLVLSWTPGFDGNALVHQFIIQFKLARNDWLMSSKQEVLGSSTFYRLTGLKPAT
TYHVRVYARNAIGTSQPGGSIRVLTKEDAPSLPPKVLNITAVSSTEVLVTWEPPPPEHCN
GVIRGYYVSYNEPNRAKVFYNVTVNGGEKMSYLIQKLKKFTEYSVVLQAFTRAGPSTRTR
KRKVKTLEDVPSQPPQFVDITVLGSQSILVTWKRPPYDSIHGVLRGYHIRYYRVSDPQSA
GETTVDRSRLNVTLRKLGKFTSYRVSVSAFTSVGDGVPSAEMKIKTAEDIPGAPSNVRAI
PVSSRKIRVRWDTPMEPNGIIREYRVLYSKVVSRPLANDTSEFVHMLRTNNSNVTSLYLT
DMESDTLYYFWVRAITAVGIGNASEVVSKRTMERIKASIFDRTLPDTLSKWKTFAILNCE
TYGSPQPTIFWYSRGKDLTNRNKYTHFNNGSLKIMNLEKEDTGKYMCTASNTLGKQTVMR
RLRVQIPPSPPQDIAFTGVGRPSAVNISWVPGFDGYSPITMFLLEHKAKGEAWKGVYISH
TLRYYILHDIDHTKPYYFRMSAINAVGTGQPARILKVQFAAEGTISSVRQVDTDEEIADD
GGGGKRFYDEPAIMGTLITVSLLIVIVVLLLVACRLKRITIKMPKDLRDLWEKAILANPG
QRSEEGRCTPIDGGTGDEGNGEGGDSASRSPSSDGHLADSSSSIEQMASTRGSLFSLPRS
NGMLHHNIAHEPIMEEPFPPPPPPYQTGSPIRAFPPPPAAHDDNISDTSSEVSFGGQVYH
RAMLHDYDCVRVRRYPASASFGSYAQPLPFQPAGVRSVTATPGNNTLGMRGPADGGSELD
TTSLAARGLESNSDIRKLFGSNYSKTRGLTLETPHSVHARTPASGISRVPESAFGSRYEI
GRRSAASRRGSNASQKLGHMKQPVIIHPEAFITAYEIRRDSASSKESNTYPVDNKALLVR
DPRDPRDARAYDSTSSEYSSSRDELMSALEYGKRHNFEKFYGIPTLETTSISSEATNSSE
QDGICKFCTSPRPVCAEMCHAPIPIRQPPYNPRSRSRGRDDAFIYVLDPRRRLVDGVVRV
QTQAEHKGSLV
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctactggattggttgcgttcttcacatcggttctcctatggcatatcaacttt
acagagtccaagccctggatactacggtttgcagatgagccagcggacaccacatttgcg
cacactcagtgggctgtattaacgtgtcacgtggcagcaaacccaccggctagcgtgaca
tggcgccttgctcgcacggatactgccgtgaccaacgtgacaggtttgcgttacgttatg
gcgaatggttcactggttttcccgccattttctgccgagagactggaccctagtattcat
cgcgtggattatcagtgtttggcgaagaacagatttggcgcgttgatcagccgggcagct
aaacttcgcgcagtcgtggttcgtccttttcgtgtttacgccatggacagcaaggtgact
ctagggaacagtgcagtcatcaaaacagtcgtcccagactacgctcagtcgtacactgcc
gtgaaggcctggtactacgatcgtcacgtggtcccgcttggtggccgctataccatcatg
ccctctggggatcttgtcataaccaacgcacacgctgaggacgaaaacagcatgtaccac
tggacagcggtcaataccctgacaggagagacacacgccagcaatccggccaagcttgtt
gtcgtaccctcatcaagtccgttcgcccctcgaatgacgtcattggtccataatttgacg
ctgatcgccggagaaaccgctgtactacagtgcacagctgcaggatcgcctacgccgtat
ttccggtggctgaagagcggtaagtcgctgaccatgggcggacggatgtctgtgatcgcg
ggtggcagtttgatgattgagagcacgatggcgtcggacgaggcgaattacacttgtcaa
gcagtcaacaacgtgggctcagtccacatggctatctacctcgaggtgatagttcctata
accttcaaagagcgtccaaaaccacaggcagctcaagtcggtttcccacggaagaacatg
gaatgcgatgtgaccggggagcctgagcccaagatcacgtggtaccagaacgcccaatca
ctgggtcagcccaagggtcgtatcagcatccgggataatgatctcgtcatcgctaccgta
tatggtcaagacaatggtgtgtaccagtgcgtagcggataacgggagggagctagtgcag
agtagtgccgagttctacgcgggctttagcgttccaaccttcaaccctgggacgcccgac
atcatcttatatccggggactccgctacagatcacgtgcgaggtatctgccattccttac
ccacgtgacgtccagtggtaccatgacgacataccgctgaccggagggcacgattacatc
attaccgcgatgcctgggaccaagcgctccagcaggctcagcaagctcagtaggacagcg
gtttccatggcagacagtggcgagtacaagtgcgtcgccagcaatgccgcagggtcagcg
gagcaggtcattaaagtctacgtcagagggccaccgaacatcacaagtttccgtagctcg
gtcaccggagtccaaggcgacaccataagtcttccttgccgagccaaaggcttcccgccc
cccgtgatcacttggtcacggtcgggacagactatcccgtatgatcgccggcagtcgata
gataacggcacacttctcatcggtaatgtacagaagagcgacagcggcaaatacacatgt
accgcggtcaacaccgcgggcgaacgagactctgttaccatgactgtcagtattgttgtc
tctcctcggatcacgccattcatgtgggcccccgttgacgagggtcagcgggaacactac
acatgcgtggtggcggaaggcgacatgccgtgtaacatcacgtggttgagggacggtaaa
ccgctgtactcaatccctggggacctagagatcatgacgtcacagttcattagttcattg
agcatcccacaggtgatgcagcgacaccagggcgtctacacgtgcattgtgggtaatcgg
gccggcatcgcgcgccactcggcccagctcatcgtctacgttccctcaaagttcgtaact
gagccgcgagaccagcaggtattgcgggaatacactgcacagctgtcatgccagaccaca
gggtacccacccgcccgggtcgaatggagtaagctacagggcagctcgttcgttccgctg
ggagacaaccaccgatttcaacagctgctgaacgggacgctagttatccgtaacgcaagc
aagcgtgacgaagggcgttactcctgtcacgcttacaacggcgtggtggggacaccggtc
agcagacaagtcagcctagtagtgcacgcagtgccagccgttattgtgagcccaccgtca
gatcggtcagtggaggtttttggtgagatggcgttttcgtgcgtcgccataggcaaccta
cccatcatgctcagctggtttaacggcagcaaacagatggtggactcgtcgcgggtccag
attatgcggtacaccaaagacaacgcccacctggtgaacggcacactgcacgtgtccgac
ctgaggctttgggacactaaggagtattcatgcagagttggcaatcagttcggacgggac
gagaagacattcaagattactgtccaggaaagtccctccaatccgtctgtgccaagggtg
agcgacatcagctcgaagtcactcgtgttgtcctggactcctgggtttgacggtaacgcg
ctcgtgcaccagtttattatccagttcaagctggccaggaatgactggctgatgagcagc
aagcaggaagtccttggaagcagcaccttctacaggctgactggactcaagcctgctacc
acctaccatgtgcgggtgtatgccaggaacgcgatcggtaccagtcagccaggcggctcc
atccgggtcctaaccaaggaagacgccccgtccctacccccaaaagtactaaacatcacg
gcagtgtcgtcaacagaggtgctagtcacgtgggagcctcccccaccggagcactgcaat
ggtgtcattcgtgggtactacgtctcgtacaacgagccaaacagagccaaggtcttctac
aacgtcacagtaaatggcggcgagaagatgagctatctcatccagaagctcaagaagttc
accgagtattcggtagttctccaggcgttcacacgggctggaccaagtacaaggacaagg
aaacgcaaagtcaagacgttagaagacgtccctagtcagccgccccagtttgttgacatc
accgttctaggctcgcaaagcatcctggtgacctggaagcgacccccttacgactcaatc
cacggtgtgttacgtggttatcatataaggtattaccgcgtgtccgacccgcaatccgcc
ggcgagaccaccgtggaccgctcgcggctgaacgtcacactgcgcaaactcgggaagttc
acgtcttaccgagtgagcgtgtcggcattcacgagcgtgggcgacggcgtcccgagcgct
gagatgaagatcaagactgccgaagacatcccaggcgctcctagtaacgtccgcgccatc
ccagtctcaagccggaagattcgcgtacgctgggacacaccgatggaacccaacggtatc
atccgggaatacagggtcctgtacagcaaggtggtgagccgaccgctggccaacgacacg
tcagagtttgtgcacatgttgaggacgaacaatagtaatgtgacgtcactgtacttaact
gacatggaatcagacaccctttactacttctgggtgcgcgccatcacagccgtggggatt
gggaacgcgtcggaagtggtcagtaagcggactatggagagaatcaaggccagcattttc
gatcgcacgttgccggacactctaagcaagtggaagacatttgccattctcaactgcgag
acgtacggatcaccgcagcctacgatcttttggtacagcagaggcaaggacttgacaaac
cgtaacaagtacactcacttcaacaatggctccctcaagatcatgaacttggagaaagag
gacacgggaaagtatatgtgtacggccagtaacacccttggtaaacagaccgtgatgaga
cgacttcgagttcagatcccaccctcccctccccaggacatcgcgttcacaggggtgggt
cgcccgtcggcggtgaacatctcgtgggtcccaggcttcgatgggtacagccctatcacc
atgtttctcctggagcacaaggcgaagggcgaggcgtggaaaggggtgtatataagtcac
accttgcgctactacatactgcacgatatcgaccacaccaagccatactacttccgcatg
tccgccatcaacgccgtgggtactgggcagcctgcgcgcatactcaaagtgcagtttgcc
gctgaagggaccatatcaagcgtgaggcaggtggacacggacgaggagatcgcggatgat
gggggcggaggcaagcgcttctatgatgagcccgcgatcatgggcaccctaatcaccgtc
agtctgctcatcgtcattgttgtgctactgctggtagcttgcaggctcaagcgcatcacg
atcaaaatgcctaaagatttgagggatttgtgggaaaaagcgatccttgctaaccctggt
cagcggagcgaagaaggaaggtgcaccccgattgatggtggtacgggtgacgaaggtaat
ggggaggggggcgatagtgcctcccgcagcccctcctcggacggccacctcgcagactcc
tcctcctccatcgagcagatggcctccacccgaggctccctcttcagtctgccgcgctcc
aatggcatgctacaccataacatcgcccacgaaccgatcatggaggagccctttccgccc
cctcccccaccgtaccagacgggctcgcccatacgcgccttcccccctccccctgcggct
cacgatgacaacataagcgacacctcgtctgaggtgagtttcggtggccaggtctaccat
cgggcgatgctccacgattacgattgtgtgcgtgtgcgaagatacccagcatccgcctcg
ttcggctcctacgcacaaccgctgcccttccagcccgcaggcgtgcgctcagttaccgcc
acgccgggtaacaacacactgggcatgcgcggcccggctgatggcggctccgagctcgac
accaccagtctggctgctaggggactagagtctaactccgacatcaggaagctttttggc
agcaattacagcaaaacccgaggtctgaccctagagacgccacactcggtgcacgctcgg
acccctgcatcggggatatcccgagtacccgagtctgcgttcggatctaggtacgagatc
ggccgacggagtgccgcgtcccgacgagggtcgaatgcgtctcagaaactcggtcatatg
aagcaaccagtgatcattcaccccgaggccttcatcaccgcgtacgagatccgcagagac
tcagcctcatccaaggagtccaacacttacccggtagacaacaaagcgctacttgtgcgg
gaccctcgcgacccgcgggacgcccgcgcgtacgactccacctcctccgagtacagctcg
tcacgtgacgagctcatgtctgccctggaatatgggaagagacacaattttgagaagttc
tacggtatcccaactctcgagacgacttcgatctcctccgaggcgacgaacagcagcgaa
caagatggcatctgtaagttctgcaccagcccccgcccggtttgtgcggagatgtgccac
gccccgattcccatccgccagcccccgtacaacccacgctcacgatcgcgtggtcgagat
gacgcgtttatctacgtgttggacccgcgtcgtcggttagtggacggagtggtgagagta
caaactcaggcagaacataaagggtcgctagtatag
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